Difference between revisions of "INOSITOL-1-4-5-TRISPHOSPHATE"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
(Created page with "Category:Gene == Gene Tiso_gene_8396 == * right end position: ** 5351 * transcription direction: ** NEGATIVE * left end position: ** 1088 * centisome position: ** 10.56926...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
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== Gene Tiso_gene_8396 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
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** 5351
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** NEGATIVE
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* common name:
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* left end position:
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** 1-butanol autotrophic biosynthesis (engineered)
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** 1088
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* centisome position:
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** 10.569264   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''8''' reactions found over '''11''' reactions in the full pathway
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* Reaction: [[RNA-LIGASE-ATP-RXN]]
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* [[2PGADEHYDRAT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 4 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_14718]]
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* Reaction: [[RXN-17925]]
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*** [[Tiso_gene_8720]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_5619]]
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*** Assignment: ec-number
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*** [[Tiso_gene_13317]]
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* Reaction: [[RXN-17926]]
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** 7 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-17927]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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== Pathways associated ==
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[3PGAREARR-RXN]]
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** 16 associated gene(s):
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*** [[Tiso_gene_2667]]
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*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_15048]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16754]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_5468]]
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*** [[Tiso_gene_20311]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_15391]]
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*** [[Tiso_gene_14212]]
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*** [[Tiso_gene_10516]]
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*** [[Tiso_gene_9923]]
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−
*** [[Tiso_gene_7201]]
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** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[CALVIN-PWY]]
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−
** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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−
** 4 associated gene(s):
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*** [[Tiso_gene_14504]]
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−
*** [[Tiso_gene_18206]]
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−
*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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* [[PHOSGLYPHOS-RXN]]
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−
** 6 associated gene(s):
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−
*** [[Tiso_gene_3527]]
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−
*** [[Tiso_gene_18263]]
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−
*** [[Tiso_gene_12104]]
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−
*** [[Tiso_gene_3526]]
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−
*** [[Tiso_gene_14642]]
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−
*** [[Tiso_gene_18264]]
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−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[PWY-101]]
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−
** 0 associated gene:
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−
* [[PWY-6883]]
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−
** 0 associated gene:
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−
* [[PYRUVDEH-RXN]]
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−
** 7 associated gene(s):
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*** [[Tiso_gene_6983]]
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−
*** [[Tiso_gene_9330]]
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−
*** [[Tiso_gene_2515]]
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−
*** [[Tiso_gene_2693]]
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−
*** [[Tiso_gene_7519]]
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−
*** [[Tiso_gene_19780]]
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*** [[Tiso_gene_17539]]
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** 3 reconstruction source(s) associated:
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-186801}}
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{{#set: right end position=5351}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: left end position=1088}}
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{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
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{{#set: centisome position=10.569264    }}
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{{#set: reaction found=8}}
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{{#set: reaction associated=RNA-LIGASE-ATP-RXN|RXN-17925|RXN-17926|RXN-17927}}
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{{#set: total reaction=11}}
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{{#set: completion rate=73.0}}
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Revision as of 15:03, 21 March 2018

Gene Tiso_gene_8396

  • right end position:
    • 5351
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1088
  • centisome position:
    • 10.569264
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=INOSITOL-1-4-5-TRISPHOSPHATE&oldid=32072"