Difference between revisions of "Tiso gene 12789"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16112 RXN-16112] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16112 RXN-16112] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-leucine degradation III
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** chloroplast_beta-keto_acyl_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** Ehrlich pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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** 1 [[CPD-17324]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17367]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18403]]
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** 1 3-oxo adrenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-hydroxy-adrenoyl-CoA[c]
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*** [[Tiso_gene_14984]]
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** 5 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[manual-primary_network]]
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* Gene: [[Tiso_gene_9871]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-7693]]
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*** Assignment: EC-NUMBER
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** 5 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_5424]]
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* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7728 PWY-7728]
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*** [[Tiso_gene_5425]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_6563]]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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*** [[Tiso_gene_6562]]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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*** [[Tiso_gene_7649]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7692 RXN-7692]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-leucine degradation III}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: common name=Ehrlich pathway}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: total reaction=3}}
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{{#set: in pathway=PWY-7728|PWY-7726}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:03, 21 March 2018

Reaction RXN-16112

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo adrenoyl-CoA[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 (3R)-hydroxy-adrenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7728, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): PWY-7728
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12789&oldid=32099"