Difference between revisions of "CPD0-1028"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BETA-LACTAMASE-RXN BETA-LACTAMASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lact...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BETA-LACTAMASE-RXN BETA-LACTAMASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** beta-lactamase
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** very long chain fatty acid biosynthesis II
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* ec number:
+
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** [http://enzyme.expasy.org/EC/3.5.2.6 EC-3.5.2.6]
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* Synonym(s):
 
* Synonym(s):
 +
** cerotate biosynthesis
 +
** hexacosanoate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''16''' reactions found over '''16''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[Beta-Lactams]][c] '''=>''' 1 [[CPD-8550]][c]
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* [[RXN-13294]]
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* With common name(s):
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** 0 associated gene:
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** 1 H2O[c] '''+''' 1 a β-lactam[c] '''=>''' 1 a substituted β-amino acid[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-13295]]
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* [[Tiso_gene_19424]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_2989]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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* [[RXN-13296]]
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***AUTOMATED-NAME-MATCH
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** 0 associated gene:
−
* [[Tiso_gene_18870]]
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** 2 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_6745]]
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* [[RXN-13297]]
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** IN-SILICO_ANNOTATION
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** 0 associated gene:
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***AUTOMATED-NAME-MATCH
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* Category: [[annotation]]
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* [[RXN-13298]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_9871]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-13299]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_9871]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-13300]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_9871]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13301]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_9871]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13302]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13303]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-13304]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-13305]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-13306]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13307]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13308]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-13309]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03743 R03743]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=very long chain fatty acid biosynthesis II}}
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** [http://www.uniprot.org/uniprot/P05192 P05192]
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{{#set: common name=cerotate biosynthesis|hexacosanoate biosynthesis}}
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** [http://www.uniprot.org/uniprot/P14488 P14488]
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{{#set: reaction found=16}}
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** [http://www.uniprot.org/uniprot/P16897 P16897]
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{{#set: total reaction=16}}
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** [http://www.uniprot.org/uniprot/P25910 P25910]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q03680 Q03680]
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−
** [http://www.uniprot.org/uniprot/P30896 P30896]
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−
** [http://www.uniprot.org/uniprot/P13661 P13661]
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−
** [http://www.uniprot.org/uniprot/P30897 P30897]
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−
** [http://www.uniprot.org/uniprot/P18251 P18251]
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−
** [http://www.uniprot.org/uniprot/P0AD64 P0AD64]
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** [http://www.uniprot.org/uniprot/P0A9Z9 P0A9Z9]
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−
** [http://www.uniprot.org/uniprot/P35391 P35391]
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−
** [http://www.uniprot.org/uniprot/Q60225 Q60225]
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−
** [http://www.uniprot.org/uniprot/Q8RT60 Q8RT60]
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−
** [http://www.uniprot.org/uniprot/Q938A8 Q938A8]
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−
** [http://www.uniprot.org/uniprot/Q52615 Q52615]
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−
** [http://www.uniprot.org/uniprot/P67920 P67920]
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** [http://www.uniprot.org/uniprot/P37323 P37323]
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** [http://www.uniprot.org/uniprot/P0A3M1 P0A3M1]
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−
** [http://www.uniprot.org/uniprot/P67918 P67918]
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−
** [http://www.uniprot.org/uniprot/Q7M136 Q7M136]
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−
** [http://www.uniprot.org/uniprot/O83024 O83024]
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−
** [http://www.uniprot.org/uniprot/P67919 P67919]
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−
** [http://www.uniprot.org/uniprot/P35392 P35392]
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−
** [http://www.uniprot.org/uniprot/P45460 P45460]
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−
** [http://www.uniprot.org/uniprot/Q9F493 Q9F493]
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−
** [http://www.uniprot.org/uniprot/Q93CA2 Q93CA2]
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−
** [http://www.uniprot.org/uniprot/Q933M6 Q933M6]
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−
** [http://www.uniprot.org/uniprot/Q8KP20 Q8KP20]
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−
** [http://www.uniprot.org/uniprot/Q59401 Q59401]
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−
** [http://www.uniprot.org/uniprot/P35393 P35393]
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−
** [http://www.uniprot.org/uniprot/P0A3M3 P0A3M3]
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−
** [http://www.uniprot.org/uniprot/P39824 P39824]
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−
** [http://www.uniprot.org/uniprot/Q9V2D6 Q9V2D6]
+
−
** [http://www.uniprot.org/uniprot/Q9PIK0 Q9PIK0]
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−
** [http://www.uniprot.org/uniprot/Q44219 Q44219]
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−
** [http://www.uniprot.org/uniprot/Q57509 Q57509]
+
−
** [http://www.uniprot.org/uniprot/Q45726 Q45726]
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−
** [http://www.uniprot.org/uniprot/Q7M176 Q7M176]
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−
** [http://www.uniprot.org/uniprot/Q06650 Q06650]
+
−
** [http://www.uniprot.org/uniprot/Q47066 Q47066]
+
−
** [http://www.uniprot.org/uniprot/P37322 P37322]
+
−
** [http://www.uniprot.org/uniprot/Q52152 Q52152]
+
−
** [http://www.uniprot.org/uniprot/P10424 P10424]
+
−
** [http://www.uniprot.org/uniprot/P00808 P00808]
+
−
** [http://www.uniprot.org/uniprot/P06548 P06548]
+
−
** [http://www.uniprot.org/uniprot/P00809 P00809]
+
−
** [http://www.uniprot.org/uniprot/P04190 P04190]
+
−
** [http://www.uniprot.org/uniprot/P0A1V8 P0A1V8]
+
−
** [http://www.uniprot.org/uniprot/P62593 P62593]
+
−
** [http://www.uniprot.org/uniprot/P05364 P05364]
+
−
** [http://www.uniprot.org/uniprot/P00807 P00807]
+
−
** [http://www.uniprot.org/uniprot/P14559 P14559]
+
−
** [http://www.uniprot.org/uniprot/P00811 P00811]
+
−
** [http://www.uniprot.org/uniprot/P18539 P18539]
+
−
** [http://www.uniprot.org/uniprot/P10509 P10509]
+
−
** [http://www.uniprot.org/uniprot/Q45107 Q45107]
+
−
** [http://www.uniprot.org/uniprot/P14171 P14171]
+
−
** [http://www.uniprot.org/uniprot/P14489 P14489]
+
−
** [http://www.uniprot.org/uniprot/P14560 P14560]
+
−
** [http://www.uniprot.org/uniprot/P05193 P05193]
+
−
** [http://www.uniprot.org/uniprot/Q7M0V8 Q7M0V8]
+
−
** [http://www.uniprot.org/uniprot/P24735 P24735]
+
−
** [http://www.uniprot.org/uniprot/Q01166 Q01166]
+
−
** [http://www.uniprot.org/uniprot/P26918 P26918]
+
−
** [http://www.uniprot.org/uniprot/P28018 P28018]
+
−
** [http://www.uniprot.org/uniprot/P22390 P22390]
+
−
** [http://www.uniprot.org/uniprot/Q00983 Q00983]
+
−
** [http://www.uniprot.org/uniprot/Q00982 Q00982]
+
−
** [http://www.uniprot.org/uniprot/P28585 P28585]
+
−
** [http://www.uniprot.org/uniprot/Q7M175 Q7M175]
+
−
** [http://www.uniprot.org/uniprot/P30899 P30899]
+
−
** [http://www.uniprot.org/uniprot/Q06778 Q06778]
+
−
** [http://www.uniprot.org/uniprot/P52663 P52663]
+
−
** [http://www.uniprot.org/uniprot/P37321 P37321]
+
−
** [http://www.uniprot.org/uniprot/Q06316 Q06316]
+
−
** [http://www.uniprot.org/uniprot/P35695 P35695]
+
−
** [http://www.uniprot.org/uniprot/Q59398 Q59398]
+
−
** [http://www.uniprot.org/uniprot/P22391 P22391]
+
−
** [http://www.uniprot.org/uniprot/P52682 P52682]
+
−
** [http://www.uniprot.org/uniprot/Q46038 Q46038]
+
−
** [http://www.uniprot.org/uniprot/Q48443 Q48443]
+
−
** [http://www.uniprot.org/uniprot/Q38058 Q38058]
+
−
** [http://www.uniprot.org/uniprot/Q59517 Q59517]
+
−
** [http://www.uniprot.org/uniprot/Q48743 Q48743]
+
−
** [http://www.uniprot.org/uniprot/Q99224 Q99224]
+
−
** [http://www.uniprot.org/uniprot/O51899 O51899]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=beta-lactamase}}
+
−
{{#set: ec number=EC-3.5.2.6}}
+
−
{{#set: gene associated=Tiso_gene_19424|Tiso_gene_2989|Tiso_gene_18870|Tiso_gene_6745}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:04, 21 March 2018

Pathway PWY-7036

  • taxonomic range:
  • common name:
    • very long chain fatty acid biosynthesis II
  • Synonym(s):
    • cerotate biosynthesis
    • hexacosanoate biosynthesis

Reaction(s) found

16 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD0-1028&oldid=32169"