Difference between revisions of "LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IPMS IPMS] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-isopropylmalate synthase * Synonym(...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IPMS IPMS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** 2-isopropylmalate synthase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GUANINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
+
** 1.0 [[WATER]][c] '''+''' 1.0 [[ACETYL-COA]][c] '''+''' 1.0 [[2-KETO-ISOVALERATE]][c] '''=>''' 1.0 [[PROTON]][c] '''+''' 1.0 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1.0 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 guanine[c] '''=>''' 1 ammonium[c] '''+''' 1 xanthine[c]
+
** 1.0 H2O[c] '''+''' 1.0 acetyl-CoA[c] '''+''' 1.0 3-methyl-2-oxobutanoate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 (2S)-2-isopropylmalate[c] '''+''' 1.0 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12280]]
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* Gene: [[Tiso_gene_11453]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
−
** '''4''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 
−
** '''7''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=2-isopropylmalate synthase}}
−
{{#set: ec number=EC-3.5.4.3}}
+
{{#set: gene associated=Tiso_gene_11453}}
−
{{#set: gene associated=Tiso_gene_12280}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:04, 21 March 2018

Reaction IPMS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-isopropylmalate synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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