Difference between revisions of "RXN0-1461"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/4.1.2.55 EC-4.1.2.55]
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* common name:
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** [http://enzyme.expasy.org/EC/4.1.2.14 EC-4.1.2.14]
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** superpathway of glycolysis and Entner-Doudoroff
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''6''' reactions in the full pathway
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** 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
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* [[6PGLUCONOLACT-RXN]]
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* With common name(s):
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** 5 associated gene(s):
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** 1 2-dehydro-3-deoxy-D-gluconate 6-phosphate[c] '''=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 pyruvate[c]
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*** [[Tiso_gene_10799]]
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*** [[Tiso_gene_20412]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5901]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15950]]
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* [[Tiso_gene_12620]]
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*** [[Tiso_gene_8585]]
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** [[pantograph]]-[[esiliculosus]]
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** 6 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
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*** [[orthology-esiliculosus]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[PWY-7310]], D-glucosaminate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7310 PWY-7310]
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*** [[orthology-athaliana]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
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*** [[orthology-creinhardtii]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[ENTNER-DOUDOROFF-PWY]]
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* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
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** 0 associated gene:
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[GLU6PDEHYDROG-RXN]]
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* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff pathway I: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
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** 2 associated gene(s):
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[Tiso_gene_16918]]
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* [[PWY-7562]], 3,6-anhydro-α-L-galactopyranose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7562 PWY-7562]
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*** [[Tiso_gene_14877]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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** 4 reconstruction source(s) associated:
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* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
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*** [[manual-primary_network]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** [[orthology-synechocystis]]
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* Category: [[orthology]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* [[GLYCOLYSIS]]
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*** Tool: [[pantograph]]
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** 0 associated gene:
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17089 17089]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=superpathway of glycolysis and Entner-Doudoroff}}
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** [http://www.uniprot.org/uniprot/P44480 P44480]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P0A955 P0A955]
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P00885 P00885]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
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** [http://www.uniprot.org/uniprot/O25729 O25729]
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** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
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** [http://www.uniprot.org/uniprot/O83578 O83578]
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** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
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** [http://www.uniprot.org/uniprot/P50846 P50846]
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** [http://www.uniprot.org/uniprot/P38448 P38448]
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** [http://www.uniprot.org/uniprot/Q55872 Q55872]
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** [http://www.uniprot.org/uniprot/P94802 P94802]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.2.55}}
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{{#set: ec number=EC-4.1.2.14}}
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{{#set: gene associated=Tiso_gene_12620}}
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{{#set: in pathway=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|PWY-7242}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:05, 21 March 2018

Pathway GLYCOLYSIS-E-D

  • taxonomic range:
  • common name:
    • superpathway of glycolysis and Entner-Doudoroff
  • Synonym(s):

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-1461&oldid=32250"