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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7559 PWY-7559] == |
| − | * direction: | + | * taxonomic range: |
| − | ** LEFT-TO-RIGHT
| + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751] |
| − | * common name:
| + | |
| − | ** cysteinyl-trna
| + | |
| − | ** cysteine--trna_ligase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16] | + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''1''' reactions found over '''2''' reactions in the full pathway |
| − | ** 1 [[CYS]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
| + | * [[RXN-6622]] |
| − | * With common name(s): | + | ** 2 associated gene(s): |
| − | ** 1 L-cysteine[c] '''+''' 1 a tRNAcys[c] '''+''' 1 ATP[c] '''=>''' 1 an L-cysteinyl-[tRNAcys][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] | + | *** [[Tiso_gene_2704]] |
| − | | + | *** [[Tiso_gene_860]] |
| − | == Genes associated with this reaction ==
| + | ** 2 reconstruction source(s) associated: |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | *** [[orthology-athaliana]] |
| − | * [[Tiso_gene_10881]] | + | *** [[orthology-synechocystis]] |
| − | ** IN-SILICO_ANNOTATION | + | == Reaction(s) not found == |
| − | ***EC-NUMBER | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-15856 RXN-15856] |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_17657]] | + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | == Pathways == | + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: taxonomic range=TAX-4751}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
| + | {{#set: reaction found=1}} |
| − | * UNIPROT:
| + | {{#set: total reaction=2}} |
| − | ** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
| + | {{#set: completion rate=50.0}} |
| − | ** [http://www.uniprot.org/uniprot/Q06752 Q06752]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43816 P43816]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29836 O29836]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O58370 O58370]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83129 O83129]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41259 P41259]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51545 O51545]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67163 O67163]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47495 P47495]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75423 P75423]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P74330 P74330]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21888 P21888]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=cysteinyl-trna}} | + | |
| − | {{#set: common name=cysteine--trna_ligase}} | + | |
| − | {{#set: ec number=EC-6.1.1.16}} | + | |
| − | {{#set: gene associated=Tiso_gene_10881|Tiso_gene_17657}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
