Difference between revisions of "CPD1F-98"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_amido...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
 
* common name:
 
* common name:
** glutamine_amidotransferase
+
** γ-linolenate biosynthesis II (animals)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''2''' reactions in the full pathway
** 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* [[1.14.19.3-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 ammonium[c] '''+''' 1 XMP[c] '''+''' 1 ATP[c] '''=>''' 1 GMP[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c]
+
*** [[Tiso_gene_2508]]
 
+
** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-9673]]
* [[Tiso_gene_6657]]
+
** 9 associated gene(s):
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_136]]
***EC-NUMBER
+
*** [[Tiso_gene_348]]
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_13394]]
***EC-NUMBER
+
*** [[Tiso_gene_4191]]
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_7855]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_500]]
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_9394]]
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_135]]
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_10876]]
== Pathways  ==
+
** 3 reconstruction source(s) associated:
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
* Category: [[orthology]]
+
*** [[annotation-experimental_annotation]]
** Source: [[orthology-athaliana]]
+
*** [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
+
== Reaction(s) not found ==
** Source: [[orthology-creinhardtii]]
+
*** Tool: [[pantograph]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
** Source: [[annotation-experimental_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-33154}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
+
{{#set: common name=γ-linolenate biosynthesis II (animals)}}
* LIGAND-RXN:
+
{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
+
{{#set: total reaction=2}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: completion rate=100.0}}
{{#set: common name=glutamine_amidotransferase}}
+
{{#set: gene associated=Tiso_gene_6657}}
+
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:08, 21 March 2018

Pathway PWY-6000

  • taxonomic range:
  • common name:
    • γ-linolenate biosynthesis II (animals)
  • Synonym(s):

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links