Difference between revisions of "RXN-11059"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-248 RXN1G-248] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta5...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-248 RXN1G-248] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** stearate biosynthesis II (bacteria and plants)
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** trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
 
* Synonym(s):
 
* Synonym(s):
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** stearic acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16380]]
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** 1 [[trans-D2-cis-cis-D5-23-C42-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-cis-D5-23-C42-2-ACPs]][c]
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** 10 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_10876]]
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** 1 a trans-delta2-cis,cis-delta5,23-C42:3-[acp][c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis,cis-delta5,23-C42:2-[acp][c]
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*** [[Tiso_gene_9394]]
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*** [[Tiso_gene_7855]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_136]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_500]]
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* Gene: [[Tiso_gene_10778]]
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*** [[Tiso_gene_13394]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_348]]
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== Pathways  ==
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*** [[Tiso_gene_12275]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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*** [[Tiso_gene_4191]]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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*** [[Tiso_gene_135]]
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== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
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* [[RXN-9632]]
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** 4 associated gene(s):
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−
*** [[Tiso_gene_15991]]
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−
*** [[Tiso_gene_5939]]
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−
*** [[Tiso_gene_14485]]
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−
*** [[Tiso_gene_19302]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
* [[RXN-9633]]
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−
** 7 associated gene(s):
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−
*** [[Tiso_gene_13083]]
+
−
*** [[Tiso_gene_10876]]
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−
*** [[Tiso_gene_136]]
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−
*** [[Tiso_gene_9885]]
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−
*** [[Tiso_gene_135]]
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−
*** [[Tiso_gene_500]]
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−
*** [[Tiso_gene_13394]]
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−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
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−
*** [[manual-primary_network]]
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
* [[RXN-9634]]
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−
** 6 associated gene(s):
+
−
*** [[Tiso_gene_500]]
+
−
*** [[Tiso_gene_135]]
+
−
*** [[Tiso_gene_136]]
+
−
*** [[Tiso_gene_13394]]
+
−
*** [[Tiso_gene_6884]]
+
−
*** [[Tiso_gene_10876]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[RXN-9635]]
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−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_10778]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-athaliana]]
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−
*** [[manual-primary_network]]
+
−
*** [[orthology-esiliculosus]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9548 RXN-9548]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase}}
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{{#set: common name=stearate biosynthesis II (bacteria and plants)}}
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{{#set: ec number=EC-1.3.1.M4}}
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{{#set: common name=stearic acid biosynthesis}}
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{{#set: gene associated=Tiso_gene_10778}}
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{{#set: reaction found=5}}
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{{#set: in pathway=PWYG-321}}
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{{#set: total reaction=6}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=83.0}}
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{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 15:10, 21 March 2018

Reaction RXN1G-248

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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