Difference between revisions of "PGIA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-324 RXN1G-324] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta15-3-oxo-C34:1-[ac...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-324 RXN1G-324] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
** cis-delta15-3-oxo-C34:1-[acyl-carrier protein] synthase
+
** starch degradation III
* ec number:
+
** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''4''' reactions in the full pathway
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[cis-delta13-lacceroyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[cis-delta15-3-oxo-gheddoyl-ACPs]][c]
+
* [[PHOSPHOGLUCMUT-RXN]]
* With common name(s):
+
** 2 associated gene(s):
** 1 a malonyl-[acp][c] '''+''' 1 a cis-delta13-C32:1-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a cis-delta15-3-oxo-C34:1-[acp][c]
+
*** [[Tiso_gene_4816]]
 
+
*** [[Tiso_gene_13477]]
== Genes associated with this reaction  ==
+
** 3 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_19302]]
+
*** [[manual-primary_network]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-experimental_annotation]]
* [[Tiso_gene_15991]]
+
* [[RXN-12171]]
** [[pantograph]]-[[esiliculosus]]
+
** 1 associated gene(s):
* [[Tiso_gene_14485]]
+
*** [[Tiso_gene_1011]]
** [[pantograph]]-[[esiliculosus]]
+
** 1 reconstruction source(s) associated:
== Pathways  ==
+
*** [[annotation-in-silico_annotation]]
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
== Reaction(s) not found ==
** '''86''' reactions found over '''182''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=CYCLOMALTODEXTRINASE-RXN CYCLOMALTODEXTRINASE-RXN]
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12181 RXN-12181]
* Category: [[orthology]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2157}}
{{#set: common name=cis-delta15-3-oxo-C34:1-[acyl-carrier protein] synthase}}
+
{{#set: common name=starch degradation III}}
{{#set: ec number=EC-2.3.1.M1}}
+
{{#set: reaction found=2}}
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485}}
+
{{#set: total reaction=4}}
{{#set: in pathway=PWYG-321}}
+
{{#set: completion rate=50.0}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
+

Revision as of 16:10, 21 March 2018

Pathway PWY-6731

  • taxonomic range:
  • common name:
    • starch degradation III
  • Synonym(s):

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links