Difference between revisions of "Tiso gene 18369"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_20348 == * right end position: ** 589 * transcription direction: ** POSITIVE * left end position: ** 224 * centisome position: ** 15.11471...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] ==
+
== Gene Tiso_gene_20348 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 589
−
* common name:
+
* transcription direction:
−
** sarcosine_dehydrogenase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.5.8.3 EC-1.5.8.3]
+
** 224
 +
* centisome position:
 +
** 15.11471   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[KDO-8PSYNTH-RXN]]
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ETF-Reduced]][c] '''+''' 1 [[FORMALDEHYDE]][c]
+
−
* With common name(s):
+
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 glycine[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 formaldehyde[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_14788]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[CRNFORCAT-PWY]], creatinine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CRNFORCAT-PWY CRNFORCAT-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-4722]], creatinine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4722 PWY-4722]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-7674]]
 +
* [[PWY-1269]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=589}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19793 19793]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=224}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00611 R00611]
+
{{#set: centisome position=15.11471    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=KDO-8PSYNTH-RXN}}
−
{{#set: common name=sarcosine_dehydrogenase}}
+
{{#set: pathway associated=PWY-7674|PWY-1269}}
−
{{#set: ec number=EC-1.5.8.3}}
+
−
{{#set: gene associated=Tiso_gene_14788}}
+
−
{{#set: in pathway=CRNFORCAT-PWY|PWY-4722}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:10, 21 March 2018

Gene Tiso_gene_20348

  • right end position:
    • 589
  • transcription direction:
    • POSITIVE
  • left end position:
    • 224
  • centisome position:
    • 15.11471
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18369&oldid=32713"