Difference between revisions of "CGMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17781 RXN-17781] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Gene == Gene Tiso_gene_18566 == * right end position: ** 2300 * transcription direction: ** POSITIVE * left end position: ** 24 * centisome position: ** 0.8163265...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17781 RXN-17781] ==
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== Gene Tiso_gene_18566 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2300
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* common name:
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* transcription direction:
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** POSITIVE
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** 3-hydroxyacyl-_dehydrogenase
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* left end position:
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** hydroxyacyl-coenzyme_a_mitochondrial
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** 24
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 0.8163265   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACOA120or]]
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** 1 [[CPD-19168]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19167]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ACOA140or]]
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** 1 (S)-3-hydroxy-(7Z)-hexadecenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxo-(7Z)-hexadecenoyl-CoA[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ACOA160or]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ACOA40or]]
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* [[Tiso_gene_14262]]
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** Source: [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[ACOA80or]]
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***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* Reaction: [[ACYL-COA-OXIDASE-RXN]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_5857]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_18838]]
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* Reaction: [[RXN-10696]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_18839]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-10706]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_14026]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[RXN-10707]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* Reaction: [[RXN-11026]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11734]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12518]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12669]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-13451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13615]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14131]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14193]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14229]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14278]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14576]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14771]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14775]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14785]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14789]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14796]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-16134]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16540]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16557]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17113]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-6920]]
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* [[PWY-7340]]
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* [[PWY-7656]]
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* [[PWY-7291]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6837]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-7007]]
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* [[PWY-7337]]
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* [[PWY-7288]]
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* [[PWY-7654]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2300}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: left end position=24}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: centisome position=0.8163265    }}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: reaction associated=ACOA120or|ACOA140or|ACOA160or|ACOA40or|ACOA80or|ACYL-COA-OXIDASE-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|RXN-10696|RXN-10706|RXN-10707|RXN-11026|RXN-11734|RXN-12518|RXN-12669|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14278|RXN-14576|RXN-14771|RXN-14775|RXN-14785|RXN-14789|RXN-14796|RXN-16134|RXN-16540|RXN-16557|RXN-17113}}
−
{{#set: gene associated=Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_18838|Tiso_gene_18839|Tiso_gene_14026}}
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{{#set: pathway associated=PWY-6920|PWY-7340|PWY-7656|PWY-7291|PWY-735|PWY-7606|PWY-7338|PWY-7094|PWY-6837|PWY66-391|PWY-5136|PWY-7726|PWY-7007|PWY-7337|PWY-7288|PWY-7654}}
−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:11, 21 March 2018

Gene Tiso_gene_18566

  • right end position:
    • 2300
  • transcription direction:
    • POSITIVE
  • left end position:
    • 24
  • centisome position:
    • 0.8163265
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CGMP&oldid=32812"