Difference between revisions of "Tiso gene 9394"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.4.99.17-RXN 5.4.99.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] == * direction: ** LEF...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.4.99.17-RXN 5.4.99.17-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ORF
+
** 4-methyl-2-oxopentanoate dehydrogenase (acylating)
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/5.4.99.17 EC-5.4.99.17]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[SQUALENE]][c] '''=>''' 1 [[HOP-2229-ENE]][c]
+
** 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOVALERYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
** 1 squalene[c] '''=>''' 1 hop-22(29)-ene[c]
+
** 1 4-methyl-2-oxopentanoate[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 isovaleryl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_12198]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7072]], hopanoid biosynthesis (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7072 PWY-7072]
+
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
** '''1''' reactions found over '''14''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17637 17637]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R07322 R07322]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01651 R01651]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ORF}}
+
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (acylating)}}
{{#set: ec number=EC-5.4.99.17}}
+
{{#set: ec number=EC-1.2.1}}
{{#set: gene associated=Tiso_gene_12198}}
+
{{#set: in pathway=LEU-DEG2-PWY}}
{{#set: in pathway=PWY-7072|PWY-6098}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:12, 21 March 2018

Reaction 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-2-oxopentanoate dehydrogenase (acylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links