Difference between revisions of "Tiso gene 19077"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11410 RXN-11410] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11410 RXN-11410] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
* common name:
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** seleno-amino acid biosynthesis
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* Synonym(s):
 
* Synonym(s):
** Se-amino acid biosynthesis
 
** selenocysteine and selenomethionine biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[RXN-12726]]
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** 1 [[DGTP]][c] '''+''' 2 [[CPD-12377]][c] '''=>''' 1 [[CPD0-1905]][c] '''+''' 1 [[WATER]][c]
** 6 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_6110]]
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** 1 dGTP[c] '''+''' 2 hydroxyl radical[c] '''=>''' 1 8-oxo-dGTP[c] '''+''' 1 H2O[c]
*** [[Tiso_gene_12184]]
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*** [[Tiso_gene_7852]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_819]]
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== Pathways  ==
*** [[Tiso_gene_17043]]
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* [[PWY-6502]], oxidized GTP and dGTP detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6502 PWY-6502]
*** [[Tiso_gene_2283]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
** 5 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
*** [[orthology-creinhardtii]]
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*** Tool: [[pathwaytools]]
*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
* [[RXN-12728]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3732]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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* [[RXN-12729]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3732]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-creinhardtii]]
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* [[SERINE-O-ACETTRAN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_7066]]
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*** [[Tiso_gene_10634]]
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*** [[Tiso_gene_4492]]
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** 6 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12730 RXN-12730]
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== External links  ==
 
== External links  ==
* PLANTCYC : PWY-6936
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{{#set: direction=LEFT-TO-RIGHT}}
* ARACYC:
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{{#set: in pathway=PWY-6502}}
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-6936 PWY-6936]
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{{#set: reconstruction category=annotation}}
{{#set: taxonomic range=TAX-33090}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
{{#set: common name=seleno-amino acid biosynthesis}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: common name=Se-amino acid biosynthesis|selenocysteine and selenomethionine biosynthesis}}
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{{#set: reaction found=4}}
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{{#set: total reaction=5}}
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{{#set: completion rate=80.0}}
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Revision as of 15:12, 21 March 2018

Reaction RXN-11410

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dGTP[c] + 2 hydroxyl radical[c] => 1 8-oxo-dGTP[c] + 1 H2O[c]

Genes associated with this reaction

Pathways

  • PWY-6502, oxidized GTP and dGTP detoxification: PWY-6502
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links