Difference between revisions of "CPD-12646"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** L-phenylalanine biosynthesis II
+
** 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
 
* Synonym(s):
 
* Synonym(s):
 +
** light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''3''' reactions in the full pathway
+
  '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[CHORISMATEMUT-RXN]]
+
* [[PROTOPORGENOXI-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11986]]
 +
*** [[Tiso_gene_15401]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[RXN-5282]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
* [[RXN-5283]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
* [[RXN-5284]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
* [[RXN-5285]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_17141]]
 +
*** [[Tiso_gene_19518]]
 +
*** [[Tiso_gene_10077]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_5940]]
+
*** [[Tiso_gene_19451]]
 
** 5 reconstruction source(s) associated:
 
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN0-1461]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3671]]
 +
*** [[Tiso_gene_2247]]
 +
*** [[Tiso_gene_13364]]
 +
*** [[Tiso_gene_13365]]
 +
*** [[Tiso_gene_2246]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 +
* [[RXN1F-20]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_11960]]
 +
*** [[Tiso_gene_5993]]
 +
*** [[Tiso_gene_9870]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
* [[UROGENDECARBOX-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18743]]
 +
*** [[Tiso_gene_19684]]
 +
*** [[Tiso_gene_18744]]
 +
*** [[Tiso_gene_5173]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-TRANSAMINE-RXN PREPHENATE-TRANSAMINE-RXN]
 
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
{{#set: taxonomic range=TAX-2763}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3462 PWY-3462]
+
{{#set: taxonomic range=TAX-33682}}
−
{{#set: taxonomic range=TAX-33090}}
+
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: taxonomic range=TAX-4751}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: common name=L-phenylalanine biosynthesis II}}
+
{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)}}
−
{{#set: reaction found=1}}
+
{{#set: common name=light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I}}
−
{{#set: total reaction=3}}
+
{{#set: reaction found=9}}
−
{{#set: completion rate=33.0}}
+
{{#set: total reaction=9}}
 +
{{#set: completion rate=100.0}}

Revision as of 15:13, 21 March 2018

Pathway CHLOROPHYLL-SYN

  • taxonomic range:
  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
  • Synonym(s):
    • light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-12646&oldid=32978"