Difference between revisions of "COA-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
(Created page with "Category:Gene == Gene Tiso_gene_10992 == * right end position: ** 5108 * transcription direction: ** POSITIVE * left end position: ** 1 * centisome position: ** 1.22865215...")
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] ==
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== Gene Tiso_gene_10992 ==
* taxonomic range:
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* right end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** 5108
* common name:
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* transcription direction:
** dTDP-D-forosamine biosynthesis
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** POSITIVE
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* left end position:
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** 1
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* centisome position:
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** 1.2286521500e-2
 
* Synonym(s):
 
* Synonym(s):
** TDP-D-forosamine biosynthesis
 
  
== Reaction(s) found ==
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== Reactions associated ==
'''2''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
* [[DTDPGLUCDEHYDRAT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
** 2 associated gene(s):
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*** Assignment: automated-name-match
*** [[Tiso_gene_12394]]
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** Source: [[orthology-athaliana]]
*** [[Tiso_gene_7329]]
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** Source: [[orthology-esiliculosus]]
** 4 reconstruction source(s) associated:
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== Pathways associated ==
*** [[orthology-athaliana]]
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* [[PWY-5129]]
*** [[annotation-in-silico_annotation]]
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* [[PWY3DJ-12]]
*** [[orthology-synechocystis]]
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* [[SPHINGOLIPID-SYN-PWY]]
*** [[orthology-esiliculosus]]
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* [[DTDPGLUCOSEPP-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14704]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12404 RXN-12404]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12406 RXN-12406]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12407 RXN-12407]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12408 RXN-12408]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12409 RXN-12409]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12943 RXN-12943]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16262 RXN-16262]
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== External links  ==
 
== External links  ==
* LIGAND-MAP:
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{{#set: right end position=5108}}
** [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
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{{#set: transcription direction=POSITIVE}}
{{#set: taxonomic range=TAX-201174}}
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{{#set: left end position=1}}
{{#set: common name=dTDP-D-forosamine biosynthesis}}
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{{#set: centisome position=1.2286521500e-2}}
{{#set: common name=TDP-D-forosamine biosynthesis}}
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{{#set: reaction associated=SERINE-C-PALMITOYLTRANSFERASE-RXN}}
{{#set: reaction found=2}}
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{{#set: pathway associated=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
{{#set: total reaction=9}}
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{{#set: completion rate=22.0}}
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Revision as of 15:16, 21 March 2018

Gene Tiso_gene_10992

  • right end position:
    • 5108
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1
  • centisome position:
    • 1.2286521500e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links