Difference between revisions of "5-L-GLUTAMYL-PEPTIDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylami...")
(Created page with "Category:Gene == Gene Tiso_gene_2386 == * right end position: ** 6336 * transcription direction: ** NEGATIVE * left end position: ** 5150 * centisome position: ** 24.06429...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
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== Gene Tiso_gene_2386 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6336
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* common name:
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* transcription direction:
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** phosphoribosylaminoimidazole_carboxylase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.1.1.21 EC-4.1.1.21]
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** 5150
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* centisome position:
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** 24.064297   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11832]]
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** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''=>''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 2 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 CO2[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''=>''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 2 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-12002]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_16011]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[athaliana]]
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* Reaction: [[RXN-7913]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7205]]
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* [[PWY-7197]]
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* [[PWY-7176]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6336}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5150}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
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{{#set: centisome position=24.064297    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-11832|RXN-12002|RXN-7913}}
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** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
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{{#set: pathway associated=PWY-7205|PWY-7197|PWY-7176}}
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** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
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** [http://www.uniprot.org/uniprot/O66608 O66608]
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** [http://www.uniprot.org/uniprot/O67239 O67239]
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** [http://www.uniprot.org/uniprot/P12045 P12045]
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** [http://www.uniprot.org/uniprot/P09029 P09029]
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** [http://www.uniprot.org/uniprot/P12044 P12044]
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** [http://www.uniprot.org/uniprot/P21264 P21264]
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** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
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** [http://www.uniprot.org/uniprot/P15567 P15567]
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** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
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** [http://www.uniprot.org/uniprot/P43849 P43849]
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** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
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** [http://www.uniprot.org/uniprot/P43850 P43850]
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** [http://www.uniprot.org/uniprot/Q58033 Q58033]
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** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
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** [http://www.uniprot.org/uniprot/P22234 P22234]
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** [http://www.uniprot.org/uniprot/P22348 P22348]
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** [http://www.uniprot.org/uniprot/Q01930 Q01930]
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** [http://www.uniprot.org/uniprot/P55195 P55195]
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** [http://www.uniprot.org/uniprot/P50504 P50504]
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** [http://www.uniprot.org/uniprot/Q55498 Q55498]
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** [http://www.uniprot.org/uniprot/P74724 P74724]
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** [http://www.uniprot.org/uniprot/O80937 O80937]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylaminoimidazole_carboxylase}}
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{{#set: ec number=EC-4.1.1.21}}
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{{#set: gene associated=Tiso_gene_16011}}
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{{#set: in pathway=PWY-6124}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:16, 21 March 2018

Gene Tiso_gene_2386

  • right end position:
    • 6336
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5150
  • centisome position:
    • 24.064297
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=5-L-GLUTAMYL-PEPTIDE&oldid=33234"