Difference between revisions of "GDRh"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_2280 == * Synonym(s): == Reactions associated == * 1.14.11.2-RXN ** pantograph-esiliculosus * RXN490-3641 ** [[pantograph]...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] == * direction: ** LEFT-TO-RIGHT * common name: ** lysophospholipase ** ORF *...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** lysophospholipase | ||
| + | ** ORF | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[1 | + | * With identifiers: |
| − | ** [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[CPD-8355]][c] '''=>''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[PROTON]][c] |
| − | * [[ | + | * With common name(s): |
| − | ** [[ | + | ** 1 H2O[c] '''+''' 1 1-18:1-2-lysophosphatidylethanolamine[c] '''=>''' 1 oleate[c] '''+''' 1 sn-glycero-3-phosphoethanolamine[c] '''+''' 1 H+[c] |
| − | == Pathways | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2505]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_12478]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_8353]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_12479]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_19778]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_15692]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_20565]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_334]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_12375]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=lysophospholipase}} | ||
| + | {{#set: common name=ORF}} | ||
| + | {{#set: ec number=EC-3.1.1.5}} | ||
| + | {{#set: gene associated=Tiso_gene_2505|Tiso_gene_12478|Tiso_gene_8353|Tiso_gene_12479|Tiso_gene_19778|Tiso_gene_15692|Tiso_gene_20565|Tiso_gene_334|Tiso_gene_12375}} | ||
| + | {{#set: in pathway=PWY-7409}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:16, 21 March 2018
Contents
Reaction RXN-15035
- direction:
- LEFT-TO-RIGHT
- common name:
- lysophospholipase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CPD-8355[c] => 1 OLEATE-CPD[c] + 1 L-1-GLYCEROPHOSPHORYLETHANOL-AMINE[c] + 1 PROTON[c]
- With common name(s):
- 1 H2O[c] + 1 1-18:1-2-lysophosphatidylethanolamine[c] => 1 oleate[c] + 1 sn-glycero-3-phosphoethanolamine[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2505
- Source: orthology-esiliculosus
- Gene: Tiso_gene_12478
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_8353
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_12479
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19778
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_15692
- Source: orthology-esiliculosus
- Gene: Tiso_gene_20565
- Source: orthology-esiliculosus
- Gene: Tiso_gene_334
- Source: orthology-esiliculosus
- Gene: Tiso_gene_12375
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-7409, phospholipid remodeling (phosphatidylethanolamine, yeast): PWY-7409
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
