Difference between revisions of "RXN-13417"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE PYRIDOXINE] == * smiles: ** CC1(=NC=C(C(=C1O)CO)CO) * common name: ** pyridoxine * i...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE PYRIDOXINE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC1(=NC=C(C(=C1O)CO)CO)
 
* common name:
 
* common name:
−
** kynureninase
+
** pyridoxine
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/3.7.1.3 EC-3.7.1.3]
+
** InChIKey=LXNHXLLTXMVWPM-UHFFFAOYSA-N
 +
* molecular weight:
 +
** 169.18   
 
* Synonym(s):
 
* Synonym(s):
 +
** vitamin B6
 +
** 2-methyl-3-hydroxy-4,5-bis(hydroxy-methyl) pyridine
 +
** pyridoxol
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[PNKIN-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[3-HYDROXY-L-KYNURENINE]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-ANTHRANILATE]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN-14181]]
−
** 1 H2O[c] '''+''' 1 3-hydroxy-L-kynurenine[c] '''=>''' 1 L-alanine[c] '''+''' 1 H+[c] '''+''' 1 3-hydroxyanthranilate[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_10685]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10684]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
+
−
** '''9''' reactions found over '''17''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 65-23-6
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25143 25143]
+
* BIGG : pydxn
−
* LIGAND-RXN:
+
* DRUGBANK : DB00165
−
** [http://www.genome.jp/dbget-bin/www_bget?R02668 R02668]
+
* PUBCHEM:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1054 1054]
−
{{#set: common name=kynureninase}}
+
* HMDB : HMDB00239
−
{{#set: ec number=EC-3.7.1.3}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Tiso_gene_10685|Tiso_gene_10684}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00314 C00314]
−
{{#set: in pathway=PWY-5651|PWY-6309}}
+
* CHEMSPIDER:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.chemspider.com/Chemical-Structure.1025.html 1025]
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
* CHEBI:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16709 16709]
 +
* METABOLIGHTS : MTBLC16709
 +
{{#set: smiles=CC1(=NC=C(C(=C1O)CO)CO)}}
 +
{{#set: common name=pyridoxine}}
 +
{{#set: inchi key=InChIKey=LXNHXLLTXMVWPM-UHFFFAOYSA-N}}
 +
{{#set: molecular weight=169.18    }}
 +
{{#set: common name=vitamin B6|2-methyl-3-hydroxy-4,5-bis(hydroxy-methyl) pyridine|pyridoxol}}
 +
{{#set: consumed by=PNKIN-RXN}}
 +
{{#set: produced by=RXN-14181}}
 +
{{#set: reversible reaction associated=PYRIDOXINE-4-DEHYDROGENASE-RXN}}

Revision as of 15:16, 21 March 2018

Metabolite PYRIDOXINE

  • smiles:
    • CC1(=NC=C(C(=C1O)CO)CO)
  • common name:
    • pyridoxine
  • inchi key:
    • InChIKey=LXNHXLLTXMVWPM-UHFFFAOYSA-N
  • molecular weight:
    • 169.18
  • Synonym(s):
    • vitamin B6
    • 2-methyl-3-hydroxy-4,5-bis(hydroxy-methyl) pyridine
    • pyridoxol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 65-23-6
  • BIGG : pydxn
  • DRUGBANK : DB00165
  • PUBCHEM:
  • HMDB : HMDB00239
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC16709





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13417&oldid=33261"