Difference between revisions of "PWY-5677"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_8048 == * right end position: ** 7709 * transcription direction: ** NEGATIVE * left end position: ** 4977 * centisome position: ** 47.04158...")
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] ==
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== Gene Tiso_gene_8048 ==
* taxonomic range:
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* right end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 7709
* common name:
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* transcription direction:
** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast)
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** NEGATIVE
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* left end position:
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** 4977
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* centisome position:
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** 47.041588   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reactions associated ==
'''6''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[RXN-15556]]
* [[PNKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
** 1 associated gene(s):
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*** Assignment: ec-number
*** [[Tiso_gene_6106]]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
** 4 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
*** [[orthology-athaliana]]
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== Pathways associated ==
*** [[orthology-creinhardtii]]
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* [[PWY-7511]]
*** [[orthology-esiliculosus]]
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* [[PNPOXI-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1471]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PRPPAMIDOTRANS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1007]]
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*** [[Tiso_gene_9914]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18748]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[PYRIDOXKIN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6106]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[PYRIMSYN3-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_2159]]
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*** [[Tiso_gene_2160]]
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*** [[Tiso_gene_16224]]
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*** [[Tiso_gene_17192]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14506 RXN-14506]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14507 RXN-14507]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-3797 RXN3O-3797]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=7709}}
{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast)}}
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{{#set: transcription direction=NEGATIVE}}
{{#set: reaction found=6}}
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{{#set: left end position=4977}}
{{#set: total reaction=9}}
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{{#set: centisome position=47.041588    }}
{{#set: completion rate=67.0}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: pathway associated=PWY-7511}}

Revision as of 15:17, 21 March 2018

Gene Tiso_gene_8048

  • right end position:
    • 7709
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4977
  • centisome position:
    • 47.041588
  • Synonym(s):

Reactions associated

Pathways associated

External links