Difference between revisions of "SUPER-OXIDE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] == * direction: ** REV...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** caffeate_o-methyltransferase
+
** queuine_trna-ribosyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
+
** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-HYDROXY-FERULIC-ACID]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[SINAPATE]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[Guanine34-in-tRNAs]][c] '''+''' 1 [[QUEUINE]][c] '''<=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNAs-with-queuine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-hydroxyferulate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 sinapate[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 a guanine34 in tRNA[c] '''+''' 1 queuine[c] '''<=>''' 1 guanine[c] '''+''' 1 a queuosine34 in tRNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18257]]
+
* Gene: [[Tiso_gene_18857]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18971]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_17]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12326]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 34: Line 37:
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02379 R02379]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=caffeate_o-methyltransferase}}
+
** [http://www.uniprot.org/uniprot/P44594 P44594]
−
{{#set: ec number=EC-2.1.1.68}}
+
** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
−
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
+
** [http://www.uniprot.org/uniprot/O32053 O32053]
−
{{#set: in pathway=PWY-2181}}
+
** [http://www.uniprot.org/uniprot/P0A847 P0A847]
 +
** [http://www.uniprot.org/uniprot/Q57878 Q57878]
 +
** [http://www.uniprot.org/uniprot/O28787 O28787]
 +
** [http://www.uniprot.org/uniprot/P54578 P54578]
 +
** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
 +
** [http://www.uniprot.org/uniprot/O67331 O67331]
 +
** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
 +
** [http://www.uniprot.org/uniprot/P40826 P40826]
 +
** [http://www.uniprot.org/uniprot/Q55983 Q55983]
 +
** [http://www.uniprot.org/uniprot/Q17361 Q17361]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=queuine_trna-ribosyltransferase}}
 +
{{#set: ec number=EC-2.4.2.29}}
 +
{{#set: gene associated=Tiso_gene_18857|Tiso_gene_17|Tiso_gene_12326}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:18, 21 March 2018

Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • queuine_trna-ribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SUPER-OXIDE&oldid=33406"