Difference between revisions of "Plastocyanin-Reduced"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7180 PWY-7180] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.133-RXN 2.7.1.133-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ras-related_gtp-bin...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7180 PWY-7180] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.133-RXN 2.7.1.133-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 2'-deoxy-α-D-ribose 1-phosphate degradation
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** ras-related_gtp-binding_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.159 EC-2.7.1.159]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[ACETALD-DEHYDROG-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[INOSITOL-1-3-4-TRIPHOSPHATE]][c] '''=>''' 1 [[CPD-505]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_7649]]
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** 1 ATP[c] '''+''' 1 D-myo-inositol (1,3,4)-trisphosphate[c] '''=>''' 1 D-myo-inositol (1,3,4,6)-tetrakisphosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_2052]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_15232]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=D-PPENTOMUT-RXN D-PPENTOMUT-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBOSE-P-ALD-RXN DEOXYRIBOSE-P-ALD-RXN]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-6366]], D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6366 PWY-6366]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6365]], D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6365 PWY-6365]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6362 PWY-6362]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6554 PWY-6554]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7180 PWY-7180]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20940 20940]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=2'-deoxy-α-D-ribose 1-phosphate degradation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03429 R03429]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=3}}
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{{#set: common name=ras-related_gtp-binding_protein}}
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{{#set: completion rate=33.0}}
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{{#set: ec number=EC-2.7.1.159}}
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{{#set: gene associated=Tiso_gene_15232}}
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{{#set: in pathway=PWY-6366|PWY-6365|PWY-6362|PWY-6554}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:18, 21 March 2018

Reaction 2.7.1.133-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ras-related_gtp-binding_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-myo-inositol (1,3,4)-trisphosphate[c] => 1 D-myo-inositol (1,3,4,6)-tetrakisphosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6366, D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis: PWY-6366
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6365, D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis: PWY-6365
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): PWY-6362
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3): PWY-6554
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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