Difference between revisions of "RXN-14501"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ORF ** at1g17160 ** ribokinase...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALACETIC_ACID OXALACETIC_ACID] == * smiles: ** C(C([O-])=O)C(=O)C([O-])=O * common name: ** o...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALACETIC_ACID OXALACETIC_ACID] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(C([O-])=O)C(=O)C([O-])=O
 
* common name:
 
* common name:
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** ORF
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** oxaloacetate
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** at1g17160
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* inchi key:
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** ribokinase
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** InChIKey=KHPXUQMNIQBQEV-UHFFFAOYSA-L
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
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** 130.057   
 
* Synonym(s):
 
* Synonym(s):
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** keto-oxaloacetate
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** oxaloacetic acid
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** oxalacetic acid
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** oxalacetate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[CSm]]
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** 1 [[ATP]][c] '''+''' 1 [[2-DEOXYRIBOSE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[PEPCARBOXYKIN-RXN]]
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* With common name(s):
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* [[OXALODECARB-RXN]]
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** 1 ATP[c] '''+''' 1 2'-deoxyribose[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* [[CSx]]
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* [[CITSYN-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PCr]]
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* [[Tiso_gene_911]]
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* [[R00357]]
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** IN-SILICO_ANNOTATION
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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***EC-NUMBER
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_17974]]
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* [[RXN-13697]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ASPAMINOTRANS-RXN]]
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* [[Tiso_gene_81]]
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* [[OAACITtm]]
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** IN-SILICO_ANNOTATION
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* [[OAAAKGtm]]
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***EC-NUMBER
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* [[MALATE-DEH-RXN]]
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* [[Tiso_gene_18204]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_82]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7682]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 328-42-7
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874]
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* BIGG : oaa
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=164550 164550]
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{{#set: direction=REVERSIBLE}}
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* HMDB : HMDB00223
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{{#set: common name=ORF}}
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* LIGAND-CPD:
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{{#set: common name=at1g17160}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00036 C00036]
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{{#set: common name=ribokinase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-2.7.1.15}}
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** [http://www.chemspider.com/Chemical-Structure.144251.html 144251]
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{{#set: gene associated=Tiso_gene_911|Tiso_gene_17974|Tiso_gene_81|Tiso_gene_18204|Tiso_gene_82|Tiso_gene_7682}}
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* CHEBI:
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{{#set: in pathway=}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16452 16452]
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{{#set: reconstruction category=orthology|annotation}}
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* METABOLIGHTS : MTBLC16452
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: smiles=C(C([O-])=O)C(=O)C([O-])=O}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=oxaloacetate}}
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{{#set: inchi key=InChIKey=KHPXUQMNIQBQEV-UHFFFAOYSA-L}}
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{{#set: molecular weight=130.057    }}
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{{#set: common name=keto-oxaloacetate|oxaloacetic acid|oxalacetic acid|oxalacetate}}
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{{#set: consumed by=CSm|PEPCARBOXYKIN-RXN|OXALODECARB-RXN|CSx|CITSYN-RXN}}
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{{#set: produced by=PCr|R00357|PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: reversible reaction associated=RXN-13697|ASPAMINOTRANS-RXN|OAACITtm|OAAAKGtm|MALATE-DEH-RXN}}

Revision as of 15:18, 21 March 2018

Metabolite OXALACETIC_ACID

  • smiles:
    • C(C([O-])=O)C(=O)C([O-])=O
  • common name:
    • oxaloacetate
  • inchi key:
    • InChIKey=KHPXUQMNIQBQEV-UHFFFAOYSA-L
  • molecular weight:
    • 130.057
  • Synonym(s):
    • keto-oxaloacetate
    • oxaloacetic acid
    • oxalacetic acid
    • oxalacetate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 328-42-7
  • BIGG : oaa
  • PUBCHEM:
  • HMDB : HMDB00223
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC16452
"C(C([O-])=O)C(=O)C([O-])=O" cannot be used as a page name in this wiki.




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