Difference between revisions of "R-3-Hydroxypalmitoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.91-RXN 3.2.1.91-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Probable 1,4-beta-D-g...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] == * direction: ** REVERSIBLE * common name: *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.91-RXN 3.2.1.91-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Probable 1,4-beta-D-glucan cellobiohydrolase C
+
** methylmalonyl-_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.91 EC-3.2.1.91]
+
** [http://enzyme.expasy.org/EC/5.4.99.2 EC-5.4.99.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Cellodextrins]][c] '''+''' n [[WATER]][c] '''=>''' n+1 [[CELLOBIOSE]][c]
+
** 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[SUC-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a cellodextrin[c] '''+''' n H2O[c] '''=>''' n+1 &beta;-D-cellobiose[c]
+
** 1 (R)-methylmalonyl-CoA[c] '''<=>''' 1 succinyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2906]]
+
* Gene: [[Tiso_gene_9771]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6788]], cellulose degradation II (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788]
+
* [[PWY0-43]], conversion of succinate to propanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-43 PWY0-43]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
 +
** '''11''' reactions found over '''18''' reactions in the full pathway
 +
* [[P108-PWY]], pyruvate fermentation to propanoate I: [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22888 22888]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00833 R00833]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07986 P07986]
+
** [http://www.uniprot.org/uniprot/Q05064 Q05064]
−
** [http://www.uniprot.org/uniprot/P07987 P07987]
+
** [http://www.uniprot.org/uniprot/P22033 P22033]
−
** [http://www.uniprot.org/uniprot/Q6UJX9 Q6UJX9]
+
** [http://www.uniprot.org/uniprot/Q05065 Q05065]
−
** [http://www.uniprot.org/uniprot/Q60029 Q60029]
+
** [http://www.uniprot.org/uniprot/O74009 O74009]
−
** [http://www.uniprot.org/uniprot/Q01763 Q01763]
+
** [http://www.uniprot.org/uniprot/Q9YBB0 Q9YBB0]
−
** [http://www.uniprot.org/uniprot/P62694 P62694]
+
** [http://www.uniprot.org/uniprot/Q9V0E8 Q9V0E8]
−
** [http://www.uniprot.org/uniprot/P13860 P13860]
+
** [http://www.uniprot.org/uniprot/Q9RV41 Q9RV41]
−
** [http://www.uniprot.org/uniprot/Q06886 Q06886]
+
** [http://www.uniprot.org/uniprot/O28068 O28068]
−
** [http://www.uniprot.org/uniprot/P10474 P10474]
+
** [http://www.uniprot.org/uniprot/Q59676 Q59676]
−
** [http://www.uniprot.org/uniprot/P19355 P19355]
+
** [http://www.uniprot.org/uniprot/Q59677 Q59677]
−
** [http://www.uniprot.org/uniprot/Q01599 Q01599]
+
** [http://www.uniprot.org/uniprot/P11652 P11652]
−
** [http://www.uniprot.org/uniprot/Q01600 Q01600]
+
** [http://www.uniprot.org/uniprot/P11653 P11653]
−
** [http://www.uniprot.org/uniprot/P15828 P15828]
+
** [http://www.uniprot.org/uniprot/P16332 P16332]
−
** [http://www.uniprot.org/uniprot/P38535 P38535]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q09431 Q09431]
+
{{#set: common name=methylmalonyl-_mitochondrial}}
−
** [http://www.uniprot.org/uniprot/P38676 P38676]
+
{{#set: ec number=EC-5.4.99.2}}
−
** [http://www.uniprot.org/uniprot/Q59325 Q59325]
+
{{#set: gene associated=Tiso_gene_9771}}
−
** [http://www.uniprot.org/uniprot/P50899 P50899]
+
{{#set: in pathway=PWY0-43|PWY-7384|PWY-5743|PWY-6728|P108-PWY|PWY-5789|PROPIONMET-PWY}}
−
** [http://www.uniprot.org/uniprot/P49075 P49075]
+
−
** [http://www.uniprot.org/uniprot/Q9XCD4 Q9XCD4]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Probable 1,4-beta-D-glucan cellobiohydrolase C}}
+
−
{{#set: ec number=EC-3.2.1.91}}
+
−
{{#set: gene associated=Tiso_gene_2906}}
+
−
{{#set: in pathway=PWY-6788}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:19, 21 March 2018

Reaction METHYLMALONYL-COA-MUT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • methylmalonyl-_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (R)-methylmalonyl-CoA[c] <=> 1 succinyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-43, conversion of succinate to propanoate: PWY0-43
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
    • 7 reactions found over 12 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-6728, methylaspartate cycle: PWY-6728
    • 11 reactions found over 18 reactions in the full pathway
  • P108-PWY, pyruvate fermentation to propanoate I: P108-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PROPIONMET-PWY, propanoyl CoA degradation I: PROPIONMET-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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