Difference between revisions of "R-3-Hydroxypalmitoyl-ACPs"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.91-RXN 3.2.1.91-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Probable 1,4-beta-D-g...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] == * direction: ** REVERSIBLE * common name: *...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
− | ** | + | ** methylmalonyl-_mitochondrial |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.99.2 EC-5.4.99.2] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[SUC-COA]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 (R)-methylmalonyl-CoA[c] '''<=>''' 1 succinyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_9771]] |
− | ** | + | ** Source: [[annotation-in-silico_annotation]] |
− | *** | + | *** Assignment: EC-NUMBER |
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY0-43]], conversion of succinate to propanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-43 PWY0-43] |
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | ||
+ | ** '''7''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] | ||
+ | ** '''4''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] | ||
+ | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[P108-PWY]], pyruvate fermentation to propanoate I: [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] | ||
+ | ** '''8''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY] | ||
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22888 22888] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00833 R00833] | ||
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q05064 Q05064] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P22033 P22033] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q05065 Q05065] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O74009 O74009] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9YBB0 Q9YBB0] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9V0E8 Q9V0E8] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9RV41 Q9RV41] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O28068 O28068] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q59676 Q59676] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q59677 Q59677] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P11652 P11652] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P11653 P11653] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P16332 P16332] |
− | + | {{#set: direction=REVERSIBLE}} | |
− | + | {{#set: common name=methylmalonyl-_mitochondrial}} | |
− | + | {{#set: ec number=EC-5.4.99.2}} | |
− | + | {{#set: gene associated=Tiso_gene_9771}} | |
− | + | {{#set: in pathway=PWY0-43|PWY-7384|PWY-5743|PWY-6728|P108-PWY|PWY-5789|PROPIONMET-PWY}} | |
− | + | ||
− | + | ||
− | {{#set: direction= | + | |
− | {{#set: common name= | + | |
− | {{#set: ec number=EC- | + | |
− | {{#set: gene associated= | + | |
− | {{#set: in pathway=PWY- | + | |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
− | {{#set: reconstruction source=annotation-experimental_annotation}} | + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} |
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Revision as of 15:19, 21 March 2018
Contents
Reaction METHYLMALONYL-COA-MUT-RXN
- direction:
- REVERSIBLE
- common name:
- methylmalonyl-_mitochondrial
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 METHYL-MALONYL-COA[c] <=> 1 SUC-COA[c]
- With common name(s):
- 1 (R)-methylmalonyl-CoA[c] <=> 1 succinyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_9771
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY0-43, conversion of succinate to propanoate: PWY0-43
- 1 reactions found over 3 reactions in the full pathway
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
- 7 reactions found over 12 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
- 4 reactions found over 11 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 11 reactions found over 18 reactions in the full pathway
- P108-PWY, pyruvate fermentation to propanoate I: P108-PWY
- 3 reactions found over 7 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
- 8 reactions found over 16 reactions in the full pathway
- PROPIONMET-PWY, propanoyl CoA degradation I: PROPIONMET-PWY
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: