Difference between revisions of "RXN-8443"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
 
* common name:
 
* common name:
−
** L-glutamine biosynthesis III
+
** 3-hydroxypropanoate cycle
 
* Synonym(s):
 
* Synonym(s):
−
** L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)
+
** 3-hydroxypropionate/malyl-CoA cycle
 +
** 3-hydroxypropionate cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''6''' reactions found over '''9''' reactions in the full pathway
+
  '''4''' reactions found over '''11''' reactions in the full pathway
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
−
** 1 associated gene(s):
+
** 4 associated gene(s):
−
*** [[Tiso_gene_13007]]
+
*** [[Tiso_gene_2812]]
−
** 3 reconstruction source(s) associated:
+
*** [[Tiso_gene_3800]]
 +
*** [[Tiso_gene_5029]]
 +
*** [[Tiso_gene_7965]]
 +
** 5 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
−
* [[ACONITATEHYDR-RXN]]
+
*** [[orthology-esiliculosus]]
 +
* [[METHYLMALONYL-COA-MUT-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_13007]]
+
*** [[Tiso_gene_9771]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[annotation-in-silico_annotation]]
 
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
−
* [[CITSYN-RXN]]
 
−
** 4 associated gene(s):
 
−
*** [[Tiso_gene_18030]]
 
−
*** [[Tiso_gene_9601]]
 
−
*** [[Tiso_gene_9603]]
 
−
*** [[Tiso_gene_9602]]
 
−
** 3 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[manual-primary_network]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
+
* [[PROPIONYL-COA-CARBOXY-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5029]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-6383]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[Tiso_gene_1773]]
+
*** [[Tiso_gene_5857]]
−
*** [[Tiso_gene_2581]]
+
*** [[Tiso_gene_16703]]
−
*** [[Tiso_gene_1154]]
+
*** [[Tiso_gene_14257]]
−
** 5 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
−
*** [[annotation-in-silico_annotation]]
+
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
*** [[annotation-experimental_annotation]]
+
*** [[orthology-creinhardtii]]
−
*** [[orthology-synechocystis]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[GLUTAMINESYN-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_13820]]
+
−
*** [[Tiso_gene_6647]]
+
−
*** [[Tiso_gene_13754]]
+
−
*** [[Tiso_gene_14842]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
* [[ISOCITDEH-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_18262]]
+
−
*** [[Tiso_gene_10809]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-experimental_annotation]]
+
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8964 RXN-8964]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-3193}}
+
{{#set: taxonomic range=TAX-200795}}
−
{{#set: common name=L-glutamine biosynthesis III}}
+
{{#set: common name=3-hydroxypropanoate cycle}}
−
{{#set: common name=L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)}}
+
{{#set: common name=3-hydroxypropionate/malyl-CoA cycle|3-hydroxypropionate cycle}}
−
{{#set: reaction found=6}}
+
{{#set: reaction found=4}}
−
{{#set: total reaction=9}}
+
{{#set: total reaction=11}}
−
{{#set: completion rate=67.0}}
+
{{#set: completion rate=36.0}}

Revision as of 15:20, 21 March 2018

Pathway PWY-5743

  • taxonomic range:
  • common name:
    • 3-hydroxypropanoate cycle
  • Synonym(s):
    • 3-hydroxypropionate/malyl-CoA cycle
    • 3-hydroxypropionate cycle

Reaction(s) found

4 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8443&oldid=33587"