Difference between revisions of "TRANS-RXN-249"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** thiamine_monophospha...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5486 PWY-5486] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5486 PWY-5486] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** ORF
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** pyruvate fermentation to ethanol II
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** thiamine_monophosphate_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
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** 2 [[PROTON]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13576]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[THIAMINE-P]][c]
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* [[ALCOHOL-DEHYDROG-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 2 H+[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 thiamine phosphate[c]
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*** [[Tiso_gene_18459]]
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*** [[Tiso_gene_7649]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_6563]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_5424]]
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* [[Tiso_gene_2159]]
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*** [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_6562]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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* [[Tiso_gene_10320]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Tiso_gene_2160]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6161 RXN-6161]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6893 PWY-6893]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=thiamine_monophosphate_synthase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-2.5.1.3}}
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{{#set: common name=pyruvate fermentation to ethanol II}}
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{{#set: gene associated=Tiso_gene_2159|Tiso_gene_10320|Tiso_gene_2160}}
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{{#set: reaction found=1}}
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{{#set: in pathway=PWY-6907|PWY-6893}}
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{{#set: total reaction=2}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:20, 21 March 2018

Pathway PWY-5486

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-249&oldid=33603"