Difference between revisions of "CENTBENZCOA-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** m...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** methionine_adenosyltransferase_regulatory_beta_subunit-related
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** L-lysine fermentation to acetate and butanoate
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.133 EC-1.1.1.133]
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* Synonym(s):
 
* Synonym(s):
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** 3-keto-5-aminohexanoate pathway
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** L-lysine fermentation to acetate and butyrate
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''10''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DTDP-RHAMNOSE]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H+[c] '''+''' 1 dTDP-4-dehydro-β-L-rhamnose[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 dTDP-β-L-rhamnose[c]
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17451]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_4472]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
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***EC-NUMBER
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*** [[orthology-synechocystis]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
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== Reaction(s) not found ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=1.4.1.11-RXN 1.4.1.11-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.8.3.9-RXN 2.8.3.9-RXN]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.14-RXN 4.3.1.14-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=BETA-LYSINE-56-AMINOMUTASE-RXN BETA-LYSINE-56-AMINOMUTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-23-AMINOMUTASE-RXN LYSINE-23-AMINOMUTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R125-RXN R125-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
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{{#set: common name=L-lysine fermentation to acetate and butanoate}}
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* LIGAND-RXN:
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{{#set: common name=3-keto-5-aminohexanoate pathway|L-lysine fermentation to acetate and butyrate}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=10}}
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** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
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{{#set: completion rate=10.0}}
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** [http://www.uniprot.org/uniprot/P37760 P37760]
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** [http://www.uniprot.org/uniprot/Q46769 Q46769]
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** [http://www.uniprot.org/uniprot/O33664 O33664]
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** [http://www.uniprot.org/uniprot/O66251 O66251]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methionine_adenosyltransferase_regulatory_beta_subunit-related}}
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{{#set: ec number=EC-1.1.1.133}}
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{{#set: gene associated=Tiso_gene_4472}}
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{{#set: in pathway=DTDPRHAMSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:20, 21 March 2018

Pathway P163-PWY

  • taxonomic range:
  • common name:
    • L-lysine fermentation to acetate and butanoate
  • Synonym(s):
    • 3-keto-5-aminohexanoate pathway
    • L-lysine fermentation to acetate and butyrate

Reaction(s) found

1 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CENTBENZCOA-PWY&oldid=33646"