Difference between revisions of "DEOXY-RIBOSE-5P"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-183963]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** Entner-Doudoroff pathway III (semi-phosphorylative)
+
** reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
 
* Synonym(s):
 
* Synonym(s):
 +
** Wood pathway
 +
** acetate synthesis
 +
** acetyl-CoA pathway
 +
** carbon monoxide dehydrogenase pathway
 +
** carbon fixation
 +
** CO2 fixation
 +
** Ljungdahl-Wood pathway
 +
** Wood-Ljungdahl pathway
 +
** reductive acetyl CoA pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
 
  '''5''' reactions found over '''9''' reactions in the full pathway
 
  '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[2PGADEHYDRAT-RXN]]
+
* [[1.5.1.20-RXN]]
−
** 4 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_14718]]
+
*** [[Tiso_gene_14582]]
−
*** [[Tiso_gene_8720]]
+
*** [[Tiso_gene_16954]]
−
*** [[Tiso_gene_5619]]
+
** 4 reconstruction source(s) associated:
−
*** [[Tiso_gene_13317]]
+
−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
−
*** [[orthology-creinhardtii]]
 
−
* [[3PGAREARR-RXN]]
 
−
** 16 associated gene(s):
 
−
*** [[Tiso_gene_2667]]
 
−
*** [[Tiso_gene_9922]]
 
−
*** [[Tiso_gene_15048]]
 
−
*** [[Tiso_gene_2841]]
 
−
*** [[Tiso_gene_14530]]
 
−
*** [[Tiso_gene_16754]]
 
−
*** [[Tiso_gene_2365]]
 
−
*** [[Tiso_gene_16271]]
 
−
*** [[Tiso_gene_5468]]
 
−
*** [[Tiso_gene_20311]]
 
−
*** [[Tiso_gene_14664]]
 
−
*** [[Tiso_gene_15391]]
 
−
*** [[Tiso_gene_14212]]
 
−
*** [[Tiso_gene_10516]]
 
−
*** [[Tiso_gene_9923]]
 
−
*** [[Tiso_gene_7201]]
 
−
** 7 reconstruction source(s) associated:
 
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
* [[FORMATETHFLIG-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_432]]
 +
*** [[Tiso_gene_7582]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
*** [[orthology-esiliculosus]]
−
*** [[orthology-synechocystis]]
+
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_6004]]
 +
*** [[Tiso_gene_432]]
 +
** 3 reconstruction source(s) associated:
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
−
*** [[orthology-creinhardtii]]
 
−
* [[GLUCONOLACT-RXN]]
 
−
** 3 associated gene(s):
 
−
*** [[Tiso_gene_1947]]
 
−
*** [[Tiso_gene_15098]]
 
−
*** [[Tiso_gene_1948]]
 
−
** 1 reconstruction source(s) associated:
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[KDPGALDOL-RXN]]
+
*** [[orthology-esiliculosus]]
 +
* [[RXN-5061]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_12620]]
+
*** [[Tiso_gene_4806]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[orthology-esiliculosus]]
 
−
* [[PEPDEPHOS-RXN]]
 
−
** 4 associated gene(s):
 
−
*** [[Tiso_gene_14504]]
 
−
*** [[Tiso_gene_18206]]
 
−
*** [[Tiso_gene_974]]
 
−
*** [[Tiso_gene_14505]]
 
−
** 7 reconstruction source(s) associated:
 
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.4-RXN 1.2.7.4-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCONATE-DEHYDRATASE-RXN GLUCONATE-DEHYDRATASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ACETYLSYNCLTH-RXN ACETYLSYNCLTH-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE-1-DEHYDROGENASE-NADP+-RXN GLUCOSE-1-DEHYDROGENASE-NADP+-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=FORMATE-DEHYDROGENASE-NADP+-RXN FORMATE-DEHYDROGENASE-NADP+-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3443 RXN-3443]
+
* [http://metacyc.org/META/NEW-IMAGE?object=METHCOCLTH-RXN METHCOCLTH-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-183963}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: taxonomic range=TAX-183924}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=Entner-Doudoroff pathway III (semi-phosphorylative)}}
+
{{#set: common name=reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)}}
 +
{{#set: common name=Wood pathway|acetate synthesis|acetyl-CoA pathway|carbon monoxide dehydrogenase pathway|carbon fixation|CO2 fixation|Ljungdahl-Wood pathway|Wood-Ljungdahl pathway|reductive acetyl CoA pathway}}
 
{{#set: reaction found=5}}
 
{{#set: reaction found=5}}
 
{{#set: total reaction=9}}
 
{{#set: total reaction=9}}
 
{{#set: completion rate=56.0}}
 
{{#set: completion rate=56.0}}

Revision as of 16:21, 21 March 2018

Pathway CODH-PWY

  • taxonomic range:
  • common name:
    • reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
  • Synonym(s):
    • Wood pathway
    • acetate synthesis
    • acetyl-CoA pathway
    • carbon monoxide dehydrogenase pathway
    • carbon fixation
    • CO2 fixation
    • Ljungdahl-Wood pathway
    • Wood-Ljungdahl pathway
    • reductive acetyl CoA pathway

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DEOXY-RIBOSE-5P&oldid=33706"