Difference between revisions of "Tiso gene 909"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** GDP-D-rhamnose biosynthesis
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** polyketide_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
* Synonym(s):
 
* Synonym(s):
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** GDP-α-D-rhamnose biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[GDPMANDEHYDRA-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[STEAROYL-COA]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_13093]]
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** 1 coenzyme A[c] '''+''' 1 a stearoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 stearoyl-CoA[c]
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*** [[Tiso_gene_13092]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_500]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN]
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=GDP-D-rhamnose biosynthesis}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: common name=GDP-α-D-rhamnose biosynthesis}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_10876}}
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{{#set: total reaction=2}}
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{{#set: in pathway=PWY3O-355}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:22, 21 March 2018

Reaction RXN3O-5304

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 a stearoyl-[acp][c] => 1 a holo-[acyl-carrier protein][c] + 1 stearoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_909&oldid=33792"