Difference between revisions of "Tiso gene 6111"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] == * smiles: ** C(C([O-])=O)=CC(=O)[O-] * inchi key: ** InChIKey=VZCYOOQTPOCHFL-OWOJBT...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16095 RXN-16095] ==
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* smiles:
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* direction:
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** C(C([O-])=O)=CC(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
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* common name:
 
* common name:
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** fumarate
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** chloroplast_beta-keto_acyl_reductase
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* molecular weight:
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* ec number:
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** 114.057   
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** fum
 
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** fumaric acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9929]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17346]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17347]][c]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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* With common name(s):
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* [[FUMARYLACETOACETASE-RXN]]
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]
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* [[FAA]]
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* [[AAL_fum]]
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== Genes associated with this reaction  ==
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* [[RXN-22]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_9871]]
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* [[FUMARATE-REDUCTASE-NADH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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* [[AMPSYN-RXN]]
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*** Assignment: EC-NUMBER
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* [[AICARSYN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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* [[AIAL]]
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*** Assignment: EC-NUMBER
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* [[ARGSUCCINLYA-RXN]]
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== Pathways  ==
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* [[FUMHYDR-RXN]]
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* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 110-17-8
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC29806
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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* DRUGBANK : DB01677
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{{#set: ec number=EC-1.1.1.330}}
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* PUBCHEM:
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{{#set: gene associated=Tiso_gene_9871}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460307 5460307]
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{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
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* KNAPSACK : C00001183
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB00134
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00122 C00122]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4573886.html 4573886]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29806 29806]
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* BIGG : fum
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{{#set: smiles=C(C([O-])=O)=CC(=O)[O-]}}
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{{#set: inchi key=InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L}}
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{{#set: common name=fumarate}}
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{{#set: molecular weight=114.057    }}
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{{#set: common name=fum|fumaric acid}}
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{{#set: consumed by=RXN-9929}}
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{{#set: produced by=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN|FUMARYLACETOACETASE-RXN|FAA|AAL_fum|RXN-22}}
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{{#set: reversible reaction associated=FUMARATE-REDUCTASE-NADH-RXN|AMPSYN-RXN|AICARSYN-RXN|AIAL|ARGSUCCINLYA-RXN|FUMHYDR-RXN}}
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Revision as of 15:22, 21 March 2018

Reaction RXN-16095

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 H+[c] + 1 3-oxo-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] => 1 NADP+[c] + 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6111&oldid=33812"