Difference between revisions of "Tiso gene 237"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16623 RXN-16623] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Tiso_gene_6614 == * right end position: ** 5743 * transcription direction: ** POSITIVE * left end position: ** 1181 * centisome position: ** 9.831835...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16623 RXN-16623] ==
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== Gene Tiso_gene_6614 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5743
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 1181
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* centisome position:
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** 9.831835   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2E-7Z-hexadeca-2-7-dienoyl-ACPs]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a (3R,7Z)-3-hydroxy-hexadec-7-enoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a (2E,7Z)-hexadeca-2,7-dienoyl-[acp][c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_6884]]
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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*** Assignment: ec-number
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5743}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=1181}}
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: centisome position=9.831835    }}
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{{#set: in pathway=PWY-7664}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:23, 21 March 2018

Gene Tiso_gene_6614

  • right end position:
    • 5743
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1181
  • centisome position:
    • 9.831835
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_237&oldid=33860"