Difference between revisions of "BUTYRYL-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-g...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** alpha-galactosidase
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** glutaryl-CoA degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''5''' reactions in the full pathway
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** 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 melibiose[c] '''+''' 1 H2O[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 D-glucopyranose[c]
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17451]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_4615]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_16101]]
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* [[RXN-11662]]
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** [[pantograph]]-[[esiliculosus]]
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** 7 associated gene(s):
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_16703]]
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* [[Tiso_gene_8673]]
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*** [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_14262]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_14026]]
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* [[Tiso_gene_3392]]
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*** [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_18839]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_5857]]
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** [[pantograph]]-[[athaliana]]
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** 5 reconstruction source(s) associated:
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* [[Tiso_gene_2588]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY0-1301]], melibiose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1301 PWY0-1301]
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*** [[orthology-creinhardtii]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-11667]]
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* Category: [[orthology]]
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** 1 associated gene(s):
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_5857]]
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*** Tool: [[pantograph]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== Reaction(s) not found ==
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTARYL-COA-DEHYDROG-RXN GLUTARYL-COA-DEHYDROG-RXN]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
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{{#set: common name=glutaryl-CoA degradation}}
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* UNIPROT:
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P16551 P16551]
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/P27756 P27756]
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{{#set: completion rate=60.0}}
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** [http://www.uniprot.org/uniprot/P04824 P04824]
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** [http://www.uniprot.org/uniprot/P06720 P06720]
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** [http://www.uniprot.org/uniprot/P06280 P06280]
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** [http://www.uniprot.org/uniprot/P51569 P51569]
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** [http://www.uniprot.org/uniprot/O93816 O93816]
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** [http://www.uniprot.org/uniprot/Q03647 Q03647]
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** [http://www.uniprot.org/uniprot/P14749 P14749]
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** [http://www.uniprot.org/uniprot/P28351 P28351]
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** [http://www.uniprot.org/uniprot/P43467 P43467]
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** [http://www.uniprot.org/uniprot/Q99172 Q99172]
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** [http://www.uniprot.org/uniprot/P41945 P41945]
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** [http://www.uniprot.org/uniprot/P41946 P41946]
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** [http://www.uniprot.org/uniprot/P41947 P41947]
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** [http://www.uniprot.org/uniprot/Q92457 Q92457]
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** [http://www.uniprot.org/uniprot/Q92456 Q92456]
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** [http://www.uniprot.org/uniprot/Q92451 Q92451]
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** [http://www.uniprot.org/uniprot/O04943 O04943]
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** [http://www.uniprot.org/uniprot/O04944 O04944]
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** [http://www.uniprot.org/uniprot/Q39811 Q39811]
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** [http://www.uniprot.org/uniprot/Q41100 Q41100]
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** [http://www.uniprot.org/uniprot/Q42656 Q42656]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=alpha-galactosidase}}
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{{#set: ec number=EC-3.2.1.22}}
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{{#set: gene associated=Tiso_gene_4615|Tiso_gene_16101|Tiso_gene_8673|Tiso_gene_3392|Tiso_gene_2588}}
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{{#set: in pathway=PWY0-1301}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:27, 21 March 2018

Pathway PWY-5177

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=BUTYRYL-COA&oldid=34242"