Difference between revisions of "PWY-7214"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_Light TransportSeed_Light] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reactio...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** uroporphyrinogen_chloroplast *...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
| + | * common name: | ||
| + | ** uroporphyrinogen_chloroplast | ||
| + | ** uroporphyrinogen_decarboxylase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[CPD-11444]][c] '''+''' 4 [[PROTON]][c] '''<=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_I]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 uroporphyrinogen-I[c] '''+''' 4 H+[c] '''<=>''' 4 CO2[c] '''+''' 1 coproporphyrinogen I[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_5173]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | * Gene: [[Tiso_gene_18744]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_18743]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_19684]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[orthology]] |
| − | ** Source: [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | *** | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=uroporphyrinogen_chloroplast}} | ||
| + | {{#set: common name=uroporphyrinogen_decarboxylase}} | ||
| + | {{#set: ec number=EC-4.1.1.37}} | ||
| + | {{#set: gene associated=Tiso_gene_5173|Tiso_gene_18744|Tiso_gene_18743|Tiso_gene_19684}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 15:27, 21 March 2018
Contents
Reaction RXN-10642
- direction:
- REVERSIBLE
- common name:
- uroporphyrinogen_chloroplast
- uroporphyrinogen_decarboxylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-11444[c] + 4 PROTON[c] <=> 4 CARBON-DIOXIDE[c] + 1 COPROPORPHYRINOGEN_I[c]
- With common name(s):
- 1 uroporphyrinogen-I[c] + 4 H+[c] <=> 4 CO2[c] + 1 coproporphyrinogen I[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5173
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18744
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18743
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19684
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
