Difference between revisions of "TRANS-RXN-218"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
(Created page with "Category:Gene == Gene Tiso_gene_13520 == * right end position: ** 4471 * transcription direction: ** POSITIVE * left end position: ** 4107 * centisome position: ** 65.7751...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
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== Gene Tiso_gene_13520 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** 4471
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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** POSITIVE
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* common name:
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* left end position:
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** incomplete reductive TCA cycle
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** 4107
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* centisome position:
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** 65.77515   
 
* Synonym(s):
 
* Synonym(s):
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** citric acid cycle variant
 
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** tricarboxylic acid cycle variant
 
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** TCA cycle variation I
 
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** incomplete reductive tricarboxylic acid cycle
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[FUMHYDR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_6720]]
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== Pathways associated ==
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1990]]
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*** [[Tiso_gene_2323]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 3 associated gene(s):
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−
*** [[Tiso_gene_15144]]
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*** [[Tiso_gene_2812]]
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*** [[Tiso_gene_15145]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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−
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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−
*** [[Tiso_gene_15846]]
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−
*** [[Tiso_gene_11866]]
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−
** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-224756}}
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{{#set: right end position=4471}}
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{{#set: taxonomic range=TAX-183939}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-183925}}
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{{#set: left end position=4107}}
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{{#set: common name=incomplete reductive TCA cycle}}
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{{#set: centisome position=65.77515    }}
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{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
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{{#set: reaction associated=ATPASE-RXN}}
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{{#set: reaction found=4}}
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−
{{#set: total reaction=7}}
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−
{{#set: completion rate=57.0}}
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Revision as of 15:27, 21 March 2018

Gene Tiso_gene_13520

  • right end position:
    • 4471
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4107
  • centisome position:
    • 65.77515
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-218&oldid=34301"