Difference between revisions of "R00771"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_3513 == * Synonym(s): == Reactions associated == * Reaction: ABor ** Source: orthology-creinhardtii * Reaction: ALDDH ** Sourc...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] ==
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== Gene Tiso_gene_3513 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** endoribonuclease_l-psp_domain-containing_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ABor]]
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** 1 [[AMMONIUM]][c] '''+''' 1 [[DIPHTINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ALDDH]]
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** 1 ammonium[c] '''+''' 1 a diphthine-[translation elongation factor 2][c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c] '''+''' 1 H+[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ALDDHm]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ALDHDEHYDROG-RXN]]
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* [[Tiso_gene_3764]]
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** Source: [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[ALDH_im4ac]]
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***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* Reaction: [[BADH-RXN]]
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* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
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** Source: [[orthology-esiliculosus]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[FTHFO]]
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* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546]
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** Source: [[orthology-creinhardtii]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[HYDROXYPYRROLINEDEH-RXN]]
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== Reconstruction information  ==
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** Source: [[orthology-synechocystis]]
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* Category: [[annotation]]
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* Reaction: [[PYRROLINECARBDEHYDROG-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pathwaytools]]
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* Reaction: [[RXN-10089]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-10715]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-10780]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-14116]]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[RXN-14209]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-14224]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-14225]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-14280]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-37]]
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-6382]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-8014]]
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** Source: [[orthology-athaliana]]
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== Pathways associated ==
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* [[ARGASEDEG-PWY]]
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* [[PWY-6853]]
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* [[PWY-5168]]
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* [[PWY-7494]]
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* [[BETSYN-PWY]]
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* [[PWY-3722]]
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* [[PWY-7269]]
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* [[PWY-0]]
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* [[PWY1F-353]]
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* [[PROUT-PWY]]
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* [[PWY-5760]]
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* [[PWY-6181]]
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* [[CHOLINE-BETAINE-ANA-PWY]]
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* [[PWY-6307]]
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* [[PWY-6313]]
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* [[PWY-3981]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=ABor|ALDDH|ALDDHm|ALDHDEHYDROG-RXN|ALDH_im4ac|BADH-RXN|FTHFO|HYDROXYPYRROLINEDEH-RXN|PYRROLINECARBDEHYDROG-RXN|RXN-10089|RXN-10715|RXN-10780|RXN-14116|RXN-14209|RXN-14224|RXN-14225|RXN-14280|RXN-37|RXN-6382|RXN-8014}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19753 19753]
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{{#set: pathway associated=ARGASEDEG-PWY|PWY-6853|PWY-5168|PWY-7494|BETSYN-PWY|PWY-3722|PWY-7269|PWY-0|PWY1F-353|PROUT-PWY|PWY-5760|PWY-6181|CHOLINE-BETAINE-ANA-PWY|PWY-6307|PWY-6313|PWY-3981}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=endoribonuclease_l-psp_domain-containing_protein}}
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{{#set: ec number=EC-6.3.1.14}}
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{{#set: gene associated=Tiso_gene_3764}}
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{{#set: in pathway=PWY-6482|PWY-7546}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:28, 21 March 2018

Gene Tiso_gene_3513

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R00771&oldid=34326"