Difference between revisions of "Pimeloyl-ACP-methyl-esters"

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(Created page with "Category:Gene == Gene Tiso_gene_20000 == * left end position: ** 60 * transcription direction: ** POSITIVE * right end position: ** 1742 * centisome position: ** 3.2258062...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase * ec numbe...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_20000 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] ==
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* left end position:
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* direction:
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** 60
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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* ec number:
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** 1742
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** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
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* centisome position:
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** 3.2258062   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.2.1.13-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NADP]][c] '''+''' 1 [[CPD-13533]][c] '''<=>''' 1 [[CPD-13534]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 NADP+[c] '''+''' 1 (R)-3-hydroxyvaleryl-CoA[c] '''<=>''' 1 &beta;-ketovaleryl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
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***ec-number
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* [[GAPDHSYNEC-RXN]]
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== Genes associated with this reaction  ==
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** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***automated-name-match
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* Gene: [[Tiso_gene_5424]]
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* [[GAPOXNPHOSPHN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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* Gene: [[Tiso_gene_10876]]
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** [[pantograph]]-[[synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_136]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_5425]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-1042]]
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*** Assignment: EC-NUMBER
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* [[P341-PWY]]
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* Gene: [[Tiso_gene_500]]
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* [[PWY66-399]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY66-373]]
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*** Assignment: EC-NUMBER
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* [[GLUCONEO-PWY]]
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* Gene: [[Tiso_gene_6562]]
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* [[GLYCOLYSIS]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6901]]
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*** Assignment: EC-NUMBER
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* [[SUCSYN-PWY]]
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* Gene: [[Tiso_gene_13394]]
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* [[P124-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6142]]
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*** Assignment: EC-NUMBER
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* [[CALVIN-PWY]]
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* Gene: [[Tiso_gene_135]]
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* [[ANAGLYCOLYSIS-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5484]]
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*** Assignment: EC-NUMBER
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* [[P185-PWY]]
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* Gene: [[Tiso_gene_6563]]
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* [[P122-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7003]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=60}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=1742}}
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{{#set: ec number=EC-1.1.1.36}}
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{{#set: centisome position=3.2258062    }}
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{{#set: gene associated=Tiso_gene_5424|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_5425|Tiso_gene_500|Tiso_gene_6562|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_6563}}
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{{#set: reaction associated=1.2.1.13-RXN|GAPDHSYNEC-RXN|GAPOXNPHOSPHN-RXN|TRIOSEPISOMERIZATION-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|SUCSYN-PWY|P124-PWY|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY-7003}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:30, 21 March 2018

Reaction RXN-12560

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 (R)-3-hydroxyvaleryl-CoA[c] <=> 1 β-ketovaleryl-CoA[c] + 1 NADPH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Pimeloyl-ACP-methyl-esters&oldid=34509"