Difference between revisions of "Tiso gene 3419"

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(Created page with "Category:Gene == Gene Tiso_gene_3527 == * left end position: ** 5150 * transcription direction: ** POSITIVE * right end position: ** 6319 * centisome position: ** 31.20644...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14385 RXN-14385] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3527 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14385 RXN-14385] ==
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* left end position:
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* direction:
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** 5150
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** cysteine_mitochondrial
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* right end position:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** 6319
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** 31.206448   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PHOSGLYPHOS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CD-S-SP-Complex]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[S-CD-S-SP-Complex]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''+''' 1 L-cysteine[c] '''=>''' 1 L-alanine[c] '''+''' 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_11478]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-1042]]
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*** Assignment: EC-NUMBER
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* [[PWY-7003]]
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** Source: [[annotation-experimental_annotation]]
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* [[SUCSYN-PWY]]
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*** Assignment: EC-NUMBER
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* [[GLYCOLYSIS]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6901]]
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* Gene: [[Tiso_gene_4284]]
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* [[P124-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6886]]
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*** Assignment: EC-NUMBER
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* [[CALVIN-PWY]]
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** Source: [[annotation-experimental_annotation]]
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* [[ANAGLYCOLYSIS-PWY]]
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*** Assignment: EC-NUMBER
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* [[GLUCONEO-PWY]]
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** Source: [[orthology-esiliculosus]]
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* [[P122-PWY]]
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* Gene: [[Tiso_gene_14710]]
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* [[P185-PWY]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5484]]
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*** Assignment: EC-NUMBER
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* [[PWY66-399]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5150}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: right end position=6319}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: centisome position=31.206448    }}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_4284|Tiso_gene_14710}}
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{{#set: pathway associated=PWY-1042|PWY-7003|SUCSYN-PWY|GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|GLUCONEO-PWY|P122-PWY|P185-PWY|PWY-5484|PWY66-399}}
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{{#set: in pathway=PWY-7250}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:31, 21 March 2018

Reaction RXN-14385

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] + 1 L-cysteine[c] => 1 L-alanine[c] + 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3419&oldid=34586"