Difference between revisions of "ITACONATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERALDEHYDE-DEHYDRO-RXN GLYCERALDEHYDE-DEHYDRO-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...")
(Created page with "Category:Gene == Gene Tiso_gene_1947 == * right end position: ** 18684 * transcription direction: ** POSITIVE * left end position: ** 13948 * centisome position: ** 61.436...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERALDEHYDE-DEHYDRO-RXN GLYCERALDEHYDE-DEHYDRO-RXN] ==
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== Gene Tiso_gene_1947 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 18684
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.99.8 EC-1.2.99.8]
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** POSITIVE
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* left end position:
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** 13948
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* centisome position:
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** 61.436813   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[14-LACTONASE-RXN]]
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** 1 [[GLYCERALD]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCERATE]][c] '''+''' 1 [[Donor-H2]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-glyceraldehyde[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 D-glycerate[c] '''+''' 1 a reduced electron acceptor[c]
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* Reaction: [[GALACTONOLACTONASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[GLUCONOLACT-RXN]]
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* [[Tiso_gene_7322]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-8783]]
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* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
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** Source: [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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== Pathways associated ==
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* Category: [[orthology]]
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* [[PWY-2221]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7165]]
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*** Tool: [[pantograph]]
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* [[NPGLUCAT-PWY]]
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* [[GLUCOSE1PMETAB-PWY]]
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* [[PWY3DJ-35471]]
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* [[GALDEG-PWY]]
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* [[PWY-5530]]
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* [[DHGLUCONATE-PYR-CAT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=18684}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30783 30783]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=13948}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01752 R01752]
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{{#set: centisome position=61.436813    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=14-LACTONASE-RXN|GALACTONOLACTONASE-RXN|GLUCONOLACT-RXN|RXN-8783}}
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{{#set: ec number=EC-1.2.99.8}}
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{{#set: pathway associated=PWY-2221|PWY-7165|NPGLUCAT-PWY|GLUCOSE1PMETAB-PWY|PWY3DJ-35471|GALDEG-PWY|PWY-5530|DHGLUCONATE-PYR-CAT-PWY}}
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{{#set: gene associated=Tiso_gene_7322}}
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{{#set: in pathway=NPGLUCAT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:33, 21 March 2018

Gene Tiso_gene_1947

  • right end position:
    • 18684
  • transcription direction:
    • POSITIVE
  • left end position:
    • 13948
  • centisome position:
    • 61.436813
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ITACONATE&oldid=34767"