Difference between revisions of "DUMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** panto...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** pantothenate_kinase_isoform_1
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.1.33 EC-2.7.1.33]
+
 
* Synonym(s):
 
* Synonym(s):
−
** type III pantothenate kinase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''=>''' 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 (R)-pantothenate[c] '''=>''' 1 (R)-4'-phosphopantothenate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 O-succinyl-L-homoserine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4467]]
+
* Gene: [[Tiso_gene_2848]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_4468]]
+
* Gene: [[Tiso_gene_11582]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_18201]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_10317]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3732]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3961]], phosphopantothenate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27826 27826]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01288 R01288]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
+
{{#set: gene associated=Tiso_gene_2848|Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_3732}}
−
** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P44793 P44793]
+
{{#set: reconstruction category=orthology}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
−
{{#set: common name=pantothenate_kinase_isoform_1}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec number=EC-2.7.1.33}}
+
−
{{#set: common name=type III pantothenate kinase}}
+
−
{{#set: gene associated=Tiso_gene_4467|Tiso_gene_4468}}
+
−
{{#set: in pathway=PANTO-PWY|PWY-3961|COA-PWY-1}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:33, 21 March 2018

Reaction RXN-9384

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 O-succinyl-L-homoserine[c] + 1 hydrogen sulfide[c] <=> 1 L-homocysteine[c] + 1 H+[c] + 1 succinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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