Difference between revisions of "D-Ribopyranose"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** amidase * ec number: ** [http...")
(Created page with "Category:Gene == Gene Tiso_gene_6339 == * right end position: ** 11619 * transcription direction: ** POSITIVE * left end position: ** 10787 * centisome position: ** 87.606...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
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== Gene Tiso_gene_6339 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11619
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* common name:
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* transcription direction:
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** amidase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
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** 10787
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* centisome position:
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** 87.6066   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENYLYLSULFATASE-RXN]]
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** 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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* With common name(s):
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** 1 indole-3-acetamide[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13682]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11619}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=10787}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
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{{#set: centisome position=87.6066    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ADENYLYLSULFATASE-RXN}}
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{{#set: common name=amidase}}
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{{#set: ec number=EC-3.5.1.4}}
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{{#set: gene associated=Tiso_gene_13682}}
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{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:34, 21 March 2018

Gene Tiso_gene_6339

  • right end position:
    • 11619
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10787
  • centisome position:
    • 87.6066
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=D-Ribopyranose&oldid=34955"