Difference between revisions of "RXN-11570"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15677 CPD-15677] == * smiles: ** CCCCCCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** amidase * ec number: ** [http...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15677 CPD-15677] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
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* smiles:
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* direction:
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** CCCCCCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=AFMMIIQKXQNEDN-DUPKWVSKSA-J
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* common name:
 
* common name:
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** 4-trans-undecenoyl-CoA
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** amidase
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* molecular weight:
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* ec number:
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** 929.765   
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** 4E-undecenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14789]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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* [[RXN-14788]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 indole-3-acetamide[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13682]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658640 90658640]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
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{{#set: smiles=CCCCCCC=CCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=AFMMIIQKXQNEDN-DUPKWVSKSA-J}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
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{{#set: common name=4-trans-undecenoyl-CoA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=929.765    }}
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{{#set: common name=amidase}}
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{{#set: common name=4E-undecenoyl-CoA}}
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{{#set: ec number=EC-3.5.1.4}}
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{{#set: consumed by=RXN-14789}}
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{{#set: gene associated=Tiso_gene_13682}}
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{{#set: produced by=RXN-14788}}
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{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:35, 21 March 2018

Reaction RXNN-404

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • amidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-5025, indole-3-acetate biosynthesis IV (bacteria): PWY-5025
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-3161, indole-3-acetate biosynthesis III (bacteria): PWY-3161
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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