Difference between revisions of "6-Dimethylallyladenosine37-tRNAs"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12362 RXN-12362] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** geranylgeranyl_diphosphate_reductase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 3 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 3 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 phytyl diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_2613]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-synechocystis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=geranylgeranyl_diphosphate_reductase}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-1.3.1.83}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_2613}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction source=annotation-in-silico_annotation}} | + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|orthology-creinhardtii}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 15:36, 21 March 2018
Contents
Reaction RXN-10625
- direction:
- LEFT-TO-RIGHT
- common name:
- geranylgeranyl_diphosphate_reductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 3 PROTON[c] + 1 GERANYLGERANYL-PP[c] + 3 NADPH[c] => 3 NADP[c] + 1 PHYTYL-PYROPHOSPHATE[c]
- With common name(s):
- 3 H+[c] + 1 geranylgeranyl diphosphate[c] + 3 NADPH[c] => 3 NADP+[c] + 1 phytyl diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2613
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
