Difference between revisions of "CPD1G-773"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-564 CPD-564] == * smiles: ** C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1) * inchi key: ** InChI...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-564 CPD-564] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] ==
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* smiles:
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* direction:
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** C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=IQFWYNFDWRYSRA-OEQWSMLSSA-N
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* common name:
 
* common name:
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** S-ribosyl-L-homocysteine
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** ORF
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* molecular weight:
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* ec number:
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** 267.296   
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** [http://enzyme.expasy.org/EC/1.14.14.18 EC-1.14.14.18]
 
* Synonym(s):
 
* Synonym(s):
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** S-Ribosylhomocysteine
 
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** Ribose-5-S-homocysteine
 
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** S-D-ribosyl-L-homocysteine
 
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** ribose-5-S-homocysteine
 
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** S-ribosylhomocysteine
 
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** S-(5-deoxy-D-ribos-5-yl)-L-homocysteine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''=>''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[FE+2]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[BILIVERDINE]][c] '''+''' 3 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 ferroheme b[c] '''+''' 2 H+[c] '''+''' 3 a reduced [NADPH-hemoprotein reductase][c] '''+''' 3 oxygen[c] '''=>''' 3 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 Fe2+[c] '''+''' 1 carbon monoxide[c] '''+''' 1 biliverdin-IX-α[c] '''+''' 3 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19364]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5874]], heme degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5874 PWY-5874]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 37558-16-0
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245776 25245776]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P23711 P23711]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17575 17575]
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** [http://www.uniprot.org/uniprot/P14901 P14901]
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* BIGG : rhcys
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** [http://www.uniprot.org/uniprot/P30519 P30519]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P06762 P06762]
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** [http://www.genome.jp/dbget-bin/www_bget?C03539 C03539]
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** [http://www.uniprot.org/uniprot/P09601 P09601]
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{{#set: smiles=C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)}}
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** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
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{{#set: inchi key=InChIKey=IQFWYNFDWRYSRA-OEQWSMLSSA-N}}
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** [http://www.uniprot.org/uniprot/P14791 P14791]
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{{#set: common name=S-ribosyl-L-homocysteine}}
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** [http://www.uniprot.org/uniprot/P32394 P32394]
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{{#set: molecular weight=267.296    }}
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** [http://www.uniprot.org/uniprot/P72849 P72849]
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{{#set: common name=S-Ribosylhomocysteine|Ribose-5-S-homocysteine|S-D-ribosyl-L-homocysteine|ribose-5-S-homocysteine|S-ribosylhomocysteine|S-(5-deoxy-D-ribos-5-yl)-L-homocysteine}}
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** [http://www.uniprot.org/uniprot/P74133 P74133]
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{{#set: produced by=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
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** [http://www.uniprot.org/uniprot/O48782 O48782]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.14.14.18}}
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{{#set: gene associated=Tiso_gene_19364}}
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{{#set: in pathway=PWY-5874}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:37, 21 March 2018

Reaction HEME-OXYGENASE-DECYCLIZING-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5874, heme degradation: PWY-5874
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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