Difference between revisions of "CPD-8860"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12763 CPD-12763] == * smiles: ** C(=O)CCCC[N+] * common name: ** 5-aminopentanal * inchi ke...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12763 CPD-12763] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)CCCC[N+]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.5.1.10 EC-2.5.1.10]
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** 5-aminopentanal
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* inchi key:
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** InChIKey=SZBGXBOFCGNPEU-UHFFFAOYSA-O
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* molecular weight:
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** 102.156   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GERANYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[FARNESYL-PP]][c]
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* [[RXN-11784]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 geranyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16284]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7102]], bisabolene biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6859]], all-trans-farnesol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49859702 49859702]
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* LIGAND-RXN:
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* HMDB : HMDB12815
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** [http://www.genome.jp/dbget-bin/www_bget?R02003 R02003]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C12455 C12455]
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** [http://www.uniprot.org/uniprot/P08524 P08524]
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{{#set: smiles=C(=O)CCCC[N+]}}
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** [http://www.uniprot.org/uniprot/P05369 P05369]
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{{#set: common name=5-aminopentanal}}
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** [http://www.uniprot.org/uniprot/P14324 P14324]
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{{#set: inchi key=InChIKey=SZBGXBOFCGNPEU-UHFFFAOYSA-O}}
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** [http://www.uniprot.org/uniprot/Q9CH81 Q9CH81]
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{{#set: molecular weight=102.156    }}
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** [http://www.uniprot.org/uniprot/Q9PM32 Q9PM32]
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{{#set: produced by=RXN-11784}}
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** [http://www.uniprot.org/uniprot/P45204 P45204]
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** [http://www.uniprot.org/uniprot/Q9JSM0 Q9JSM0]
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** [http://www.uniprot.org/uniprot/P49350 P49350]
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** [http://www.uniprot.org/uniprot/P22939 P22939]
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** [http://www.uniprot.org/uniprot/Q08291 Q08291]
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** [http://www.uniprot.org/uniprot/P49349 P49349]
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** [http://www.uniprot.org/uniprot/Q09152 Q09152]
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** [http://www.uniprot.org/uniprot/P49351 P49351]
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** [http://www.uniprot.org/uniprot/P49352 P49352]
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** [http://www.uniprot.org/uniprot/Q43315 Q43315]
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** [http://www.uniprot.org/uniprot/O24241 O24241]
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** [http://www.uniprot.org/uniprot/O24242 O24242]
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** [http://www.uniprot.org/uniprot/Q92334 Q92334]
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** [http://www.uniprot.org/uniprot/Q92218 Q92218]
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** [http://www.uniprot.org/uniprot/Q92235 Q92235]
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** [http://www.uniprot.org/uniprot/Q92250 Q92250]
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** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]
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** [http://www.uniprot.org/uniprot/P49353 P49353]
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** [http://www.uniprot.org/uniprot/O04882 O04882]
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** [http://www.uniprot.org/uniprot/O65004 O65004]
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** [http://www.uniprot.org/uniprot/O14230 O14230]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.5.1.10}}
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{{#set: gene associated=Tiso_gene_16284}}
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{{#set: in pathway=PWY-7736|PWY-7721|PWY-5123|PWY-7102|PWY-6859}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=orthology-athaliana|manual-primary_network|orthology-esiliculosus|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:37, 21 March 2018

Metabolite CPD-12763

  • smiles:
    • C(=O)CCCC[N+]
  • common name:
    • 5-aminopentanal
  • inchi key:
    • InChIKey=SZBGXBOFCGNPEU-UHFFFAOYSA-O
  • molecular weight:
    • 102.156
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)CCCC[N+" cannot be used as a page name in this wiki.



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