Difference between revisions of "Ubiquitin-carrier-protein-E2-L-cysteine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** threonine_syntha...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** inosine-5_-monop...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ORF
+
** inosine-5_-monophosphate_dehydrogenase
−
** threonine_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.205 EC-1.1.1.205]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-threonine[c]
+
** 1 NAD+[c] '''+''' 1 IMP[c] '''+''' 1 H2O[c] '''<=>''' 1 XMP[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12871]]
+
* Gene: [[Tiso_gene_6377]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_418]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-synechocystis]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_2614]]
+
** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_419]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
+
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 50: Line 47:
 
** Source: [[manual-primary_network]]
 
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11708 11708]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01130 R01130]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P04990 P04990]
+
** [http://www.uniprot.org/uniprot/P12268 P12268]
−
** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
+
** [http://www.uniprot.org/uniprot/P21620 P21620]
−
** [http://www.uniprot.org/uniprot/O28953 O28953]
+
** [http://www.uniprot.org/uniprot/P50098 P50098]
−
** [http://www.uniprot.org/uniprot/P66902 P66902]
+
** [http://www.uniprot.org/uniprot/P50097 P50097]
−
** [http://www.uniprot.org/uniprot/O59293 O59293]
+
** [http://www.uniprot.org/uniprot/O26245 O26245]
−
** [http://www.uniprot.org/uniprot/O66864 O66864]
+
** [http://www.uniprot.org/uniprot/Q9PAR5 Q9PAR5]
−
** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
+
** [http://www.uniprot.org/uniprot/P65172 P65172]
−
** [http://www.uniprot.org/uniprot/O58587 O58587]
+
** [http://www.uniprot.org/uniprot/Q9X168 Q9X168]
−
** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
+
** [http://www.uniprot.org/uniprot/Q9KTW3 Q9KTW3]
−
** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
+
** [http://www.uniprot.org/uniprot/Q9YBU2 Q9YBU2]
−
** [http://www.uniprot.org/uniprot/O26354 O26354]
+
** [http://www.uniprot.org/uniprot/Q9CIY6 Q9CIY6]
−
** [http://www.uniprot.org/uniprot/O29700 O29700]
+
** [http://www.uniprot.org/uniprot/P21879 P21879]
−
** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
+
** [http://www.uniprot.org/uniprot/P0ADG7 P0ADG7]
−
** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
+
** [http://www.uniprot.org/uniprot/P56088 P56088]
−
** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
+
** [http://www.uniprot.org/uniprot/P49058 P49058]
−
** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
+
** [http://www.uniprot.org/uniprot/O58045 O58045]
−
** [http://www.uniprot.org/uniprot/P44503 P44503]
+
** [http://www.uniprot.org/uniprot/Q9UY49 Q9UY49]
−
** [http://www.uniprot.org/uniprot/Q58860 Q58860]
+
** [http://www.uniprot.org/uniprot/Q9PKM2 Q9PKM2]
−
** [http://www.uniprot.org/uniprot/O66740 O66740]
+
** [http://www.uniprot.org/uniprot/Q9RT87 Q9RT87]
−
** [http://www.uniprot.org/uniprot/O50114 O50114]
+
** [http://www.uniprot.org/uniprot/Q9JUD0 Q9JUD0]
−
** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
+
** [http://www.uniprot.org/uniprot/Q59011 Q59011]
−
** [http://www.uniprot.org/uniprot/P23669 P23669]
+
** [http://www.uniprot.org/uniprot/Q9PNN3 Q9PNN3]
−
** [http://www.uniprot.org/uniprot/P27735 P27735]
+
** [http://www.uniprot.org/uniprot/P44334 P44334]
−
** [http://www.uniprot.org/uniprot/Q00063 Q00063]
+
** [http://www.uniprot.org/uniprot/O67820 O67820]
−
** [http://www.uniprot.org/uniprot/P74193 P74193]
+
** [http://www.uniprot.org/uniprot/P65167 P65167]
−
** [http://www.uniprot.org/uniprot/P73711 P73711]
+
** [http://www.uniprot.org/uniprot/Q9ZL14 Q9ZL14]
−
** [http://www.uniprot.org/uniprot/P16120 P16120]
+
** [http://www.uniprot.org/uniprot/Q9JZB5 Q9JZB5]
−
** [http://www.uniprot.org/uniprot/P00934 P00934]
+
** [http://www.uniprot.org/uniprot/Q9HXM5 Q9HXM5]
−
** [http://www.uniprot.org/uniprot/P29363 P29363]
+
** [http://www.uniprot.org/uniprot/P0C0H6 P0C0H6]
−
** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
+
** [http://www.uniprot.org/uniprot/P42851 P42851]
−
** [http://www.uniprot.org/uniprot/P45837 P45837]
+
** [http://www.uniprot.org/uniprot/P47996 P47996]
−
** [http://www.uniprot.org/uniprot/Q42598 Q42598]
+
** [http://www.uniprot.org/uniprot/Q9RHG9 Q9RHG9]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/P24547 P24547]
−
{{#set: common name=ORF}}
+
** [http://www.uniprot.org/uniprot/Q9RHG1 Q9RHG1]
−
{{#set: common name=threonine_synthase}}
+
** [http://www.uniprot.org/uniprot/P31002 P31002]
−
{{#set: ec number=EC-4.2.3.1}}
+
** [http://www.uniprot.org/uniprot/Q07152 Q07152]
−
{{#set: gene associated=Tiso_gene_12871|Tiso_gene_418|Tiso_gene_2614|Tiso_gene_419}}
+
** [http://www.uniprot.org/uniprot/P38697 P38697]
−
{{#set: in pathway=HOMOSER-THRESYN-PWY}}
+
** [http://www.uniprot.org/uniprot/P50094 P50094]
 +
** [http://www.uniprot.org/uniprot/P39567 P39567]
 +
** [http://www.uniprot.org/uniprot/P50095 P50095]
 +
** [http://www.uniprot.org/uniprot/Q49729 Q49729]
 +
** [http://www.uniprot.org/uniprot/O14344 O14344]
 +
** [http://www.uniprot.org/uniprot/O32912 O32912]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=inosine-5_-monophosphate_dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.205}}
 +
{{#set: gene associated=Tiso_gene_6377}}
 +
{{#set: in pathway=PWY-7221|PWY-5695|PWY-6596}}
 
{{#set: reconstruction category=orthology|manual|annotation}}
 
{{#set: reconstruction category=orthology|manual|annotation}}
 
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:37, 21 March 2018

Reaction IMP-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • inosine-5_-monophosphate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5695, urate biosynthesis/inosine 5'-phosphate degradation: PWY-5695
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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