Difference between revisions of "3.4.11.18-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-like_pr...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** protoporphyrinogen IX oxidase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ca2+-activated_spot-like_protein
+
** protoporphyrinogen IX oxidase
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* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GDP-TP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GTP]][c]
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** 1.0 [[PROTOPORPHYRINOGEN]][h] '''+''' 3.0 [[OXYGEN-MOLECULE]][h] '''=>''' 3.0 [[HYDROGEN-PEROXIDE]][h] '''+''' 1.0 [[PROTOPORPHYRIN_IX]][h]
 
* With common name(s):
 
* With common name(s):
−
** 1 pppGpp[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 GTP[c]
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** 1.0 protoporphyrinogen IX[h] '''+''' 3.0 oxygen[h] '''=>''' 3.0 hydrogen peroxide[h] '''+''' 1.0 protoporphyrin IX[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6799]]
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* Gene: [[Tiso_gene_15401]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
−
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
−
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33055 33055]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ca2+-activated_spot-like_protein}}
+
{{#set: common name=protoporphyrinogen IX oxidase}}
−
{{#set: ec number=EC-3.1.7.2}}
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{{#set: gene associated=Tiso_gene_15401}}
−
{{#set: gene associated=Tiso_gene_6799}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PPGPPMET-PWY}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:38, 21 March 2018

Reaction PPPGO

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protoporphyrinogen IX oxidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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