Difference between revisions of "CPD-1825"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALPMUT-RXN GALPMUT-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** udp-galactopyranose...")
(Created page with "Category:Gene == Gene Tiso_gene_15481 == * right end position: ** 7662 * transcription direction: ** NEGATIVE * left end position: ** 5075 * centisome position: ** 63.2162...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALPMUT-RXN GALPMUT-RXN] ==
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== Gene Tiso_gene_15481 ==
* direction:
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* right end position:
** REVERSIBLE
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** 7662
* common name:
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* transcription direction:
** ORF
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** NEGATIVE
** udp-galactopyranose_mutase
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* left end position:
* ec number:
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** 5075
** [http://enzyme.expasy.org/EC/5.4.99.9 EC-5.4.99.9]
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* centisome position:
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** 63.216244   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
** 1 [[CPD-14553]][c] '''<=>''' 1 [[UDP-D-GALACTO-14-FURANOSE]][c]
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* With common name(s):
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** 1 UDP-&alpha;-D-galactose[c] '''<=>''' 1 UDP-&alpha;-D-galactofuranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15395]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3775]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397]
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** '''2''' reactions found over '''17''' reactions in the full pathway
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* [[OANTIGEN-PWY]], O-antigen building blocks biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7622]], UDP-galactofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7622 PWY-7622]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
*** Tool: [[pathwaytools]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=7662}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24132 24132]
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{{#set: transcription direction=NEGATIVE}}
* LIGAND-RXN:
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{{#set: left end position=5075}}
** [http://www.genome.jp/dbget-bin/www_bget?R00505 R00505]
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{{#set: centisome position=63.216244    }}
* UNIPROT:
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
** [http://www.uniprot.org/uniprot/Q9PML8 Q9PML8]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=udp-galactopyranose_mutase}}
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{{#set: ec number=EC-5.4.99.9}}
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{{#set: gene associated=Tiso_gene_15395|Tiso_gene_3775}}
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{{#set: in pathway=PWY-6397|OANTIGEN-PWY|PWY-7328|PWY-7622}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:39, 21 March 2018

Gene Tiso_gene_15481

  • right end position:
    • 7662
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5075
  • centisome position:
    • 63.216244
  • Synonym(s):

Reactions associated

Pathways associated

External links