Difference between revisions of "CPD-499"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYMALTOPHOSPHORYL-RXN GLYMALTOPHOSPHORYL-RXN] == * direction: ** REVERSIBLE * common name: ** thym...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinyl-pal...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYMALTOPHOSPHORYL-RXN GLYMALTOPHOSPHORYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thymidine_phosphorylase
+
** all-trans-retinyl-palmitate hydrolase
 +
** ORF
 +
** alpha_beta_hydrolase_fold_protein
 +
** alpha_beta_hydrolase
 +
** serine_esterase
 +
** sialate_o-acetylesterase-like_protein
 +
** lysophospholipase
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
+
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Glycogens]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[MALTOTETRAOSE]][c] '''+''' 1 [[GLC-1-P]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13524]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a glycogen[c] '''+''' 1 phosphate[c] '''<=>''' 1 maltotetraose[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c]
+
** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1011]]
+
* Gene: [[Tiso_gene_1537]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4650]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12686]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10066]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17029]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11351]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_1538]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19778]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16518]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4606]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1922]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2556]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9429]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=thymidine_phosphorylase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
−
{{#set: ec number=EC-2.4.1.1}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_1011}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: common name=serine_esterase}}
 +
{{#set: common name=sialate_o-acetylesterase-like_protein}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=protein_chloroplastic}}
 +
{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_1537|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_17029|Tiso_gene_11351|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_1922|Tiso_gene_2556|Tiso_gene_9429}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:39, 21 March 2018

Reaction 3.1.1.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • all-trans-retinyl-palmitate hydrolase
    • ORF
    • alpha_beta_hydrolase_fold_protein
    • alpha_beta_hydrolase
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 all-trans-retinyl palmitate[c] => 1 palmitate[c] + 1 H+[c] + 1 all-trans-retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-499&oldid=35456"