Difference between revisions of "TRNA-with-7-aminomethyl-7-deazaguanine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15740 RXN-15740] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.5.3 EC-1.1.5.3]
+
** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Menaquinones]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Menaquinols]][c]
+
** 1 [[CPD-5161]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a menaquinone[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''=>''' 1 glycerone phosphate[c] '''+''' 1 a menaquinol[c]
+
** 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_15777]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1582]], glycerol-3-phosphate to fumarate electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1582 PWY0-1582]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''19''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY0-1581]], nitrate reduction IX (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1581 PWY0-1581]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.5.3}}
+
{{#set: ec number=EC-2.4.1.257}}
−
{{#set: gene associated=Tiso_gene_15777}}
+
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
−
{{#set: in pathway=PWY0-1582|PWY0-1581}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 15:40, 21 March 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 GDP-α-D-mannose[c] => 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 GDP[c] + 1 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




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