Difference between revisions of "RXN-14387"

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(Created page with "Category:Gene == Gene Tiso_gene_6282 == * left end position: ** 170 * transcription direction: ** POSITIVE * right end position: ** 1318 * centisome position: ** 1.3759611...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6282 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 170
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** arginyl-trna_synthetase
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* right end position:
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** arginine-trna_ligase
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** 1318
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
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** 1.3759611   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.26.3-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ARG-tRNAs]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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***ec-number
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* With common name(s):
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* [[RXN-8038]]
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** 1 a tRNAarg[c] '''+''' 1 L-arginine[c] '''+''' 1 ATP[c] '''=>''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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** [[pantograph]]-[[athaliana]]
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* [[RXN-8040]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN1F-147]]
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* Gene: [[Tiso_gene_12997]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN1F-148]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN1F-150]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN1F-151]]
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* Gene: [[Tiso_gene_16360]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[PWY-5947]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5946]]
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*** Assignment: EC-NUMBER
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* [[PWY-5943]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7591]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=170}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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{{#set: right end position=1318}}
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* LIGAND-RXN:
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{{#set: centisome position=1.3759611    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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{{#set: reaction associated=3.1.26.3-RXN|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5947|PWY-5946|PWY-5943|PWY-7591}}
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=arginyl-trna_synthetase}}
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{{#set: common name=arginine-trna_ligase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=Tiso_gene_12997|Tiso_gene_16360}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:40, 21 March 2018

Reaction ARGININE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • arginyl-trna_synthetase
    • arginine-trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAarg[c] + 1 L-arginine[c] + 1 ATP[c] => 1 an L-arginyl-[tRNAarg][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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